Bifidobacterium dentium JCM 1195 = DSM 20436: BBDE_1205
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Entry
BBDE_1205 CDS
T04222
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bdn
Bifidobacterium dentium JCM 1195 = DSM 20436
Pathway
bdn00260
Glycine, serine and threonine metabolism
bdn00460
Cyanoamino acid metabolism
bdn00630
Glyoxylate and dicarboxylate metabolism
bdn00670
One carbon pool by folate
bdn00680
Methane metabolism
bdn01100
Metabolic pathways
bdn01110
Biosynthesis of secondary metabolites
bdn01120
Microbial metabolism in diverse environments
bdn01200
Carbon metabolism
bdn01230
Biosynthesis of amino acids
bdn01240
Biosynthesis of cofactors
bdn04981
Folate transport and metabolism
Module
bdn_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
bdn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BBDE_1205
09102 Energy metabolism
00680 Methane metabolism
BBDE_1205
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BBDE_1205
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
BBDE_1205
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BBDE_1205
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
BBDE_1205
Enzymes [BR:
bdn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
BBDE_1205
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Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
SelA
Motif
Other DBs
NCBI-ProteinID:
BAQ27199
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All DBs
Position
complement(1418958..1420265)
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AA seq
435 aa
AA seq
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MTASPLAQTPNDMFNAPIAQADPEIAAVLDAELSRQQDGLEMIASENFVPRAVLQAQGSV
LTNKYAEGYPGRRYYGGCEQVDKIETIARERAKSLFGAEYVNVQPHSGAQANAAVYQALV
KPGDTVLGLALDHGGHLTHGMKINFSGRFYHAEAYGVNPETFRIDPEIIRQRALETHPAM
IIGGWSAYPRIEDFKAMKEIADEVGAKFWVDMAHFAGLVAAGLHPSPVPYADVVSSTAHK
TLGGPRSGFILAKQDYAKKLNSAVFPGQQGGPLMHVIAGKAVAFKVAASEEFKDRMQRTL
DGAKILAERLTADDVKNNGISVLTGGTDVHLVMVDLRNSEMDGQQGEDLLAQCGITINRN
TVPFDPRPASVASGLRIGTSALATRGFGSKEYEEVADIIGTALAAGKDANVDALKARVDK
LAEDFPLYPGLDQIH
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcatcacctctcgcccagaccccgaacgacatgttcaatgcccccatcgcccag
gccgatcccgaaatcgccgccgtgctcgacgccgaactgtcccgtcagcaagacggcttg
gagatgatcgcctccgaaaacttcgtgccacgtgcggttctgcaggctcagggctccgtg
cttaccaacaagtatgccgaaggctatccaggacgtcgttactatggcggctgcgaacag
gtcgataagatcgagaccatcgcacgtgaacgcgccaagagcctgtttggcgccgaatac
gtcaacgtccagccccattccggcgcccaagccaatgcggccgtctaccaggcgctcgtc
aagcccggagacacggtactcggtctggccctcgatcacggcggacatctcacccacggc
atgaaaatcaatttctccggccgtttctaccatgccgaagcctatggtgtgaaccctgaa
accttccgcatcgatccggaaatcatccgtcagcgcgcactcgaaacccaccccgccatg
atcatcggcggctggagcgcctacccgcgcatcgaagacttcaaagccatgaaggaaatc
gccgacgaagtcggcgccaaattctgggttgacatggcccacttcgccggccttgtcgcc
gccgggctgcacccaagcccggtcccatacgccgacgtcgtttcctccaccgcgcacaaa
accctcggcggaccacgttccggcttcatcctcgccaagcaggactatgccaagaagctc
aactccgccgtattccccggacagcagggcggcccactcatgcatgtgatcgcaggcaag
gccgtcgccttcaaagtcgcggcctccgaagaattcaaggaccgcatgcagcgtaccctc
gacggcgccaagatcctcgcagaacgcctcactgccgacgacgtcaaaaacaatggcatc
agcgtcctgacgggcggcaccgacgtgcacctagtcatggtcgacctgcgtaacagcgaa
atggacggacagcaaggcgaagacctgctcgcacaatgcggcatcaccatcaaccgcaac
accgtgccgttcgacccacgcccggcatccgtggcatccggcctgcgcatcggcaccagc
gccctcgccacccgaggcttcggatccaaggaatacgaagaggtcgccgacatcatcggc
accgcgctcgcagccggcaaggatgcgaacgtagacgcactgaaggcccgtgtcgacaag
cttgccgaagacttcccgctgtacccgggcctcgatcagatccactga
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