Bifidobacterium dentium JCM 1195 = DSM 20436: BBDE_1547
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Entry
BBDE_1547 CDS
T04222
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
bdn
Bifidobacterium dentium JCM 1195 = DSM 20436
Pathway
bdn00300
Lysine biosynthesis
bdn00470
D-Amino acid metabolism
bdn01100
Metabolic pathways
bdn01110
Biosynthesis of secondary metabolites
bdn01120
Microbial metabolism in diverse environments
bdn01230
Biosynthesis of amino acids
Module
bdn_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bdn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BBDE_1547
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BBDE_1547
Enzymes [BR:
bdn01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
BBDE_1547
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
BAQ27541
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Position
complement(1825961..1826860)
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AA seq
299 aa
AA seq
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MSIPSIVYKAHATGNDFVVYADPDGRYEPTADEVRFLCDRHFGIGGDGLIRLAHPQDVSD
LKEAQLADCAAGQAEWFMDYRNADGSLAEMCGNGTRAITLFAQRQGLADRPGGEPFRLGT
RAGVKILTSLGEVEGLGKDVFRVEMGSWQRGDVDGYEVSIPGTAGSARGTFVDMGNPHVV
AVIEDAFASLPTVEELDLVAKPVVSPEIPTDQNVEFVRIDEQSEGDDEGEATMRVNERGC
GETLSCGTGLCATAITLRSKTGIDHWTITVRGGTLRVDVTDDDVTLTGSATIVGKVELL
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgagtatccccagcattgtttacaaagcgcacgccaccggcaatgatttcgtggtctat
gcggatcccgacggccgatacgagccgaccgccgacgaagttcggttcctgtgcgaccgt
cattttggcattggcggcgacgggctgattcgtctcgcgcacccgcaggatgtgtccgac
ctgaaggaggcgcaactcgccgactgcgccgcgggccaagccgaatggttcatggattac
cgcaatgcggacggcagcctggccgaaatgtgcggcaacggcacgcgtgcgattaccttg
ttcgcgcaacggcaagggctcgccgaccggcccggtggcgaaccgttccgccttggtacg
cgcgccggcgtgaagatcctgacgtcgctcggcgaggtggaaggactcggcaaggacgtg
ttccgcgtcgaaatgggctcatggcagcgaggcgacgtcgacgggtacgaggtgtcgatt
cctggaaccgccggttcggcgcgcggcacgttcgtggacatgggcaacccgcatgtggtc
gcggtgatcgaggatgcgttcgcctcgctaccgaccgtggaagagcttgacctggtcgcc
aagccggtggtctcgcccgagattccgaccgaccagaacgtggaattcgtgcgcatcgac
gagcagagcgaaggcgacgacgaaggggaggccaccatgcgcgtgaacgaacgcggttgc
ggcgaaacgctctcctgcggtaccggcctgtgtgccacggcgattacgttgcgttccaaa
accggcatcgaccattggaccatcacggttcgcggcggcaccctacgcgtggacgtgacc
gatgatgacgtgacgcttacgggcagcgccacgatcgtcggcaaagtggaattgctgtaa
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