Bifidobacterium dentium JCM 1195 = DSM 20436: BBDE_1627
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Entry
BBDE_1627 CDS
T04222
Name
(GenBank) putative DNA repair helicase
Organism
bdn
Bifidobacterium dentium JCM 1195 = DSM 20436
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Gene cluster
GFIT
Motif
Pfam:
DUF3427
ResIII
Helicase_C
PLDc_2
SWI2_SNF2
DEAD
RE_NgoFVII
Motif
Other DBs
NCBI-ProteinID:
BAQ27621
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Position
1941597..1944749
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AA seq
1050 aa
AA seq
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MTDDGWQQNSSLIESLLSGFVEKKDDVDPQYEPMLIANHDGRTMEYAIKDELGRSQNFDM
SVAFVSQGALQTLKQNFLDFADSNDHRSGRIITSTFNYFNSPKAFAELLKLQQETGIQVR
IWQPGQTDETENTADFPYHPKGYVFHHSDDDEPLYSTYIGSSNLTINALNSNREWNLRVA
TTDTSGLAEQLTAEINSQISESKPLTDAWLKLYEEDFKRYAPPRRPNRRQTQDAGTITPN
AMQVEALMNLAQLRKQGESRAIIISATGTGKTYLSAFDVRQFKPKRMLYIAQQEQILKKA
KESYQKVLGCPAKELGLFSGISKEHDRKYLFATVQTMSRPEVLVQFGKDDFDYILIDEVH
HAAADSYKRIIDYFTPDFMLGMTATPERTDGANIFELFGNNVAYEIRLQRALEESMLCPF
HYYGVHEYIQEAPNGRLLGKQIKASDWTEQERNDLSHWLEELTSPSRVHYIIDKIQLYGE
AGTDVQGLVFCSRREEAKRLSALFNQQINQQAERPYHTKAITGEHSQAERDLAVEQLENG
ELDYIFTVDLFNEGVDIPHINQIVMLRQTQSSIIFTQQLGRGLRKASGKDSVVVIDFIGN
YANNYLIPIALYGNTGDRDVARKNLQRETIGISSISFDKIARERVLASLDTADLSNMQLL
SRQYQQMRYELGRIPMLMDIARRDASLVYTMAAKNDDYLSFVRSREKSLSRGRHATASYL
EQLEPTSEVHNGMLKMLTATQLRGLRPHELLILAVLCGLDWNAIDPECSERSSTAFHSAK
TLDSLGIADLQKLLPELFPGADNSELQWRSALATLDYSYFIAANSQRFGKTPFITVDNGE
RCRLSDVFVEQLDNPTFNLFLEDTVKAGLCNALTLERNAVKHRIVQNHGFIYGEKYSVFD
VMRLCGWQAEQVPQNVGGYKLDSLTNTLPIFIKYEASQYGDRFLDSGEIEWFSKNNRSLK
SNEFRWLLDGTERPLTWQDRHFVPIFIRRKAEEKETSYYFVGNAASLHDVRESVNVGEDG
KESKVVISTLKLMKPVDPELYRHLTGKSAL
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgacggacgatggctggcagcagaattcttctctgatcgaatcgcttctttcgggtttc
gtggaaaagaaagacgatgtcgatccacaatacgagccgatgctgatcgcgaaccatgat
ggcaggaccatggaatatgcgatcaaggatgaacttggccgcagtcagaatttcgacatg
tccgttgccttcgtcagtcagggcgccttgcagacgctgaagcagaatttccttgatttt
gccgacagcaacgaccatcggtccggcagaatcatcacgtctaccttcaactactttaac
tccccgaaggctttcgccgaactactgaagctacagcaggaaacaggcatccaagtacgg
atctggcagcccggtcagaccgacgagaccgaaaacaccgccgatttcccatatcatcca
aagggttatgtctttcaccattcggatgatgacgaaccgctctactccacatacatcggc
agctccaatctcaccatcaacgcgctgaattccaatcgtgaatggaatctgagagtcgca
accaccgataccagcggcctggccgaacagctcactgctgaaatcaactcccagatcagc
gaatcgaagccactcaccgacgcatggctcaaactgtatgaggaggatttcaaaaggtac
gcgccaccgcgccgaccaaatcgcaggcagacacaggatgcaggaaccatcacgccgaat
gccatgcaagtcgaagcgttgatgaatcttgcacaactgcgcaaacagggcgaaagccga
gcaatcatcatttccgcgaccggcaccggcaaaacatacctatccgcatttgacgtccgt
caattcaagccaaaacgcatgttgtacattgcacagcaggaacaaatcctgaaaaaggcc
aaggaatcatatcagaaagtactcggttgccccgctaaggaactcggcctgttttccggc
atcagcaaggaacacgatcgcaaatacctgttcgcgaccgtgcagacgatgtcccgcccg
gaagtgcttgtgcagttcggcaaagacgatttcgattacattctgatcgatgaagtacac
catgcggcagctgactcgtacaaacgaatcatcgactacttcaccccggatttcatgctc
ggtatgaccgcaacgccggaacgtaccgacggagccaatatcttcgagctattcggcaac
aacgtggcgtatgagatccgtttgcagcgggcgcttgaagagagcatgctctgcccgttt
cattattacggggttcacgagtacattcaggaagccccgaacggcagattgctcggcaag
cagatcaaggcgagcgactggactgagcaggaacgcaacgatctgtctcattggctcgag
gagctcaccagcccaagccgcgtgcactatatcatcgacaaaatccagttgtacggcgaa
gccggcaccgacgtgcaaggtctggtcttctgcagtcggcgcgaagaggcgaagcgcctg
tccgctttgttcaatcagcagatcaaccaacaggcggaacgtccgtatcacacaaaggcg
attaccggcgaacattcccaagcggagcgtgatcttgccgttgaacaactggagaatggc
gagctggattacattttcacggtcgacctgttcaatgaaggtgtggatattccgcatatc
aaccagattgtgatgctccggcagacccagtcgagcatcatcttcacgcaacagcttgga
cgcggactgcgtaaggcaagcggcaaggattcggttgtcgtcattgatttcatcggcaat
tatgcgaataactatctgattccgatcgcactgtatggcaataccggcgatcgcgacgtc
gcccgtaagaacctgcagcgcgagacgatcggcatttcttcgatcagtttcgacaagatc
gcccgcgagcgcgtgctggcttcgctcgataccgccgacttgtcgaatatgcagttgctc
agccgtcaataccagcagatgcggtatgagctgggtcgcattccgatgctcatggatatc
gcacgacgtgacgcttcgctggtatacaccatggctgcaaagaatgatgattacctatcg
tttgtacgttctcgcgaaaagagcctttctcgcggcaggcatgcgactgcttcgtatctg
gaacaacttgagccgacttccgaggtgcacaatggcatgttgaagatgctgaccgccacg
caacttcgtggattgcgacctcacgagttgctgattttggcggtactgtgcggattggat
tggaatgcgattgatcccgaatgcagcgagcggtcgtctacagcgtttcattccgccaag
actttggattcgttgggcattgccgatctccagaagctactgcccgagctttttcctggc
gccgataatagcgaactgcagtggcggtccgcattggcaacacttgactactcatatttc
attgccgcgaacagccagcgttttgggaagactccgttcattaccgtcgacaatggcgag
cgttgcagactctctgatgtttttgttgaacaactggacaatccgacattcaacctgttc
cttgaggacaccgtcaaagccggtctgtgtaacgcactgactctggaacggaacgcggtg
aagcatcgaatcgtgcaaaatcatggatttatctatggcgagaaatacagcgtcttcgat
gtgatgcggctgtgtggctggcaagccgagcaggtgccgcagaacgtcggcggctacaag
cttgactctctcaccaatacgttgccgatcttcatcaagtacgaggcgagtcaatatggt
gatcgttttcttgactccggtgaaatcgaatggttcagcaaaaacaaccggtcgttgaaa
tccaacgaattccggtggctgcttgatggaaccgaacgccctctgacatggcaggatcgc
cactttgtgccgatcttcatccggcgcaaggcagaggaaaaagagacttcatactacttt
gtcggcaatgcggcgtcattgcatgatgtacgcgaatccgtcaatgtcggtgaggatggc
aaggaatccaaggtagtcatctccacgctcaaactcatgaagcccgtcgacccggagctt
taccgccaccttactggcaaatccgcactgtga
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