Bifidobacterium dentium JCM 1195 = DSM 20436: BBDE_1880
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Entry
BBDE_1880 CDS
T04222
Name
(GenBank) Clp protease
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
bdn
Bifidobacterium dentium JCM 1195 = DSM 20436
Brite
KEGG Orthology (KO) [BR:
bdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
bdn03110
]
BBDE_1880
Chaperones and folding catalysts [BR:
bdn03110
]
Heat shock proteins
HSP100
BBDE_1880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
Clp_N
AAA_16
Sigma54_activat
AAA_22
ATPase_2
nSTAND3
AAA_14
TniB
AAA_7
IstB_IS21
Mg_chelatase
AAA_24
bpMoxR
AAA_3
NBD_SMAX1
NACHT
NYD-SP28
T2SSE
Zeta_toxin
HOOK
ResIII
DNA_pol3_delta2
AAA_23
AAA_19
ABC_tran_CTD
Motif
Other DBs
NCBI-ProteinID:
BAQ27874
LinkDB
All DBs
Position
complement(2263405..2266158)
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AA seq
917 aa
AA seq
DB search
MAVKSVEHIRQRHMRRIAVDSRQVSYEDDTRAARIMEDDMEQKFTTMAQEAIGDAIQSAS
AAGNAQVDTLHVMDALLRQENGVIRGLIQAAGGDVQAIGAAVRNALVALPAASGSTTSQP
QASRQLTAAIAQAEKEMQAMGDEYVSTEHLLIGIAASKPNQSAEILEKNGVTAEALRKAV
PGVRGGAKVTSPDAERSYKALEKYSTDLTAAAKDGKLDPVIGRDQEIRRVIQILSRRTKN
NPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQNKKLISLDLGSMVAGSKYRGEFEERLK
SVLEEIKKSDGQIITFIDEIHTIVGAGAAEGSMDAGNMLKPMLARGELRLIGATTLDEYR
ENVEKDPALERRFQQVFVGEPSVEDTIAILRGLKQRYEAHHKVTIGDDALVAAATLSNRY
ISGRQLPDKAIDLVDEAAAHLRMELDSSPEEIDELQRKVTRYEMEEMQLKKAEDPASKDR
LEKLQADLADAREKLSGLKARWDAEKAGHNKVGDLRAKLDDLRVEADKAMREGDLEKASR
ISYGEIPAIQKELAAAEAAADNNDANGTAVAETEPMVPDHVDADSVAGIVSEWTGIPVGR
LMQGENEKLLHMEEYLGKRVIGQKEAIAAVSDAVRRSRAGISDPNRPTGSFLFLGPTGVG
KTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLIGAAPGYIGYEEGGQLTEAVRRRP
YSVVLFDEVEKANPEVFDVLLQVLDDGRLTDGQGRTVDFKNTILIMTSNLGSQFLVNPDL
DADAKKKAVMDAVHMQFKPEFINRLDELVMFHPLTREELGGIVDIQVAQVSARLTERRIT
LDVTDSAREWLANTGYDPAYGARPLRRLVQTEVGDQLARMLLAGQVHDGDTVLVDQTGGD
HLELSAWASDQLADMGK
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgaagtcggttgagcatatcagacaacgacatatgcgccggattgcggtcgat
tcgcggcaagtgagctacgaagacgatacgcgagcggcgcgaatcatggaggatgatatg
gaacaaaagttcaccacgatggcgcaggaagccatcggagacgccattcaaagcgcgtcc
gcggcaggtaacgcgcaagtcgacacgttgcatgtgatggatgcgttgctgcgccaggaa
aacggtgtgatccgcggcctcatccaggctgccggcggcgacgtgcaagccatcggcgct
gcggtgcgcaacgccttggtcgcgttgccggctgccagcggttcgaccacatcgcagccg
caggcaagccgtcagctgaccgccgcgatcgcgcaggccgaaaaggaaatgcaggcgatg
ggcgacgaatacgtctccaccgaacacctgctcatcggcatcgcggcaagcaagccgaac
caatccgcggaaatccttgaaaagaacggcgtgaccgccgaagcgctgcgcaaggcggtg
ccgggcgtgcgtggcggcgcgaaagtgaccagccccgacgcggaaagatcgtacaaggcg
ctcgaaaagtattccaccgacctgacggccgccgcgaaagacggcaagctcgaccccgtg
atcggccgcgatcaagagatccgccgcgtcatccagatcctgagccggcgcaccaagaac
aatccggtgctcatcggcgagccgggcgtcggcaaaaccgccgtcgtggaaggtctggcg
cagcgcatcgtcgccggtgacgtgccgaccaccctgcagaacaagaagctgatctcgctc
gacctcggctccatggtcgcgggctccaagtatcgcggcgaattcgaggaacgactgaag
agcgtgctcgaggagatcaagaagtctgacgggcagatcatcaccttcatcgacgaaatc
cacaccatcgtcggtgcgggcgccgccgaaggctccatggacgcaggcaatatgctcaag
cccatgctggcccgcggcgaactacgcctgatcggtgcgaccacgctcgacgaatatcga
gagaacgtcgaaaaggatccggcactggaacgccgcttccaacaggtcttcgtcggcgaa
ccgagcgtggaagacacgattgcgatcctgcgtggtctgaagcaacgttacgaggcgcac
cacaaggtgacgatcggcgacgatgcgctggtcgccgccgcaaccctgtcgaaccggtat
atctccggccgccagctgcccgacaaggccatcgacctggtcgacgaggcagccgcgcac
ctgcgtatggaactcgactcctcgccggaggaaatcgacgaactgcaacgcaaggtgacc
cgctacgaaatggaggagatgcagctcaagaaggccgaagaccccgcttcgaaggaccgc
ctcgagaagctgcaggccgatctggcggacgcccgcgaaaagctgagcggcctcaaggca
cgttgggatgcggaaaaggccggccacaacaaggtcggcgatttgcgagccaagctcgac
gacctgcgcgtagaagccgacaaggccatgcgcgaaggcgacctggagaaggccagccgc
atctcgtacggcgagatccccgcgattcagaaggaactggccgcagcggaagccgccgcc
gacaacaatgacgcgaacggcaccgcggtcgccgaaaccgaaccgatggtgcccgaccac
gtcgatgccgattccgtggccggcatcgtatccgaatggaccggcatcccggtcggccgc
ctcatgcaaggcgagaatgaaaagctcctgcacatggaggagtatctcggcaagcgtgtg
atcggccagaaggaagccatcgcagcggtttcggacgccgtgcggcgctcgcgtgccggc
atctccgacccgaatcgtccgaccggctcgttcctgttcctaggccccaccggcgtgggc
aagaccgaactggccaaggcgctcgcggacttcctgttcgacgacgagaaggccatggtg
cgcatcgacatgagcgaatacatggaaaaggcctccgtgtctcgcctgatcggcgccgcg
ccgggctacatcggctacgaggagggcggccagctcaccgaggccgtacgccgccgtcca
tactcggtggtgctgttcgacgaggtggagaaagccaatccggaagtattcgacgtgctg
ctgcaagtgctcgacgatggccgtctgaccgatggtcagggccgtaccgtggacttcaag
aacacgattctgatcatgacctccaatttggggtcgcaattcctcgtcaatccggacttg
gatgcggacgccaagaagaaggccgtgatggatgccgtgcacatgcagttcaagccggaa
ttcatcaaccgcttggacgagctggtcatgttccacccgctcacccgtgaggaactgggc
ggcatcgtggacatccaggtggcgcaggtctccgctcgcctgaccgagcgtcgcatcacg
ctcgatgtgaccgattcggcacgcgaatggctggccaacaccggctacgatccggcgtat
ggcgctcgcccgctgcgtcgcctggtgcagaccgaggtcggcgatcagctggcgcgcatg
ctgctggctggccaggtgcatgacggcgacaccgtgttggtggatcagaccggcggcgat
catctcgaactgtccgcatgggcgagcgatcaactggcggacatgggcaagtaa
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integrated database retrieval system
