Bifidobacterium dentium JCM 1195 = DSM 20436: BBDE_1987
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Entry
BBDE_1987 CDS
T04222
Name
(GenBank) ABC transporter ATP-binding and permease components
KO
K18890
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
bdn
Bifidobacterium dentium JCM 1195 = DSM 20436
Pathway
bdn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
bdn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
BBDE_1987
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bdn02000
]
BBDE_1987
Transporters [BR:
bdn02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
BBDE_1987
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Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
AAA_21
AAA_30
AAA_18
RsgA_GTPase
AAA_7
Zeta_toxin
SbcC_Walker_B
AAA_23
AAA_25
TsaE
IstB_IS21
SRP54
MMR_HSR1
AAA_29
AAA_28
DEAD
KAP_NTPase
Motif
Other DBs
NCBI-ProteinID:
BAQ27981
LinkDB
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Position
complement(2411536..2413323)
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AA seq
595 aa
AA seq
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MAKRNTFREDEELEEQINLHDILRIGVYLKPYMARVARILAVVVMMSCIAVVVPYLTKIM
IDSAIPAKNLTLLGGLAALLAVLIVIYELGLRYRTVEITRVGQLMLKDMRRDIFTHIQTL
PFSYFDSRPHGKILIRVVNYVNTLSDTLSSGLINVISDVFTFLITLVVMFVVDWRLALFS
LVLFPFLIAWVLVLQHFQRRAYQVLSNKQSNLNAYIHESIAGVKTTQTFAQEAAQFKTFQ
EQQNDVRASWMKAVHIQFLMWPGIQTISVMTIAFIYYVGVTGFGAVNVTTGVLIAFVGYA
NNFWNPVISIGNFYNQLITCSAYLERIFETLDVQPEIRNAPDAKDLPQIEGRVDFNDVVF
RYEPDGRNILNLVDLHVEPGRTIALVGPTGAGKTTIINLLSRFYDVAEGSVTIDGYDVRD
VTLESLRRQMGVMLQDTFIFSGNVRDNIRYGKLDATDAEIEAAARAVHAHEFIMDLPDGY
DTVVEERGSTLSAGQRQLIAFARVLLADPRILILDEATSNIDTRTEEALQAGLNHLLKGR
TSFIIAHRLSTIENADEICYIDHGQIVEHGNHEELLARKGAYYRLYESQYAMIKV
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacgcaacacatttcgtgaagacgaggagcttgaggagcagatcaatctgcat
gacatccttcgtatcggcgtctatctgaaaccatatatggcacgtgtggcccgcatcctc
gccgtagtcgtgatgatgagctgcatcgccgtcgtcgtgccgtatctgacgaaaatcatg
atcgacagtgcgattccggccaagaatctcacgctactcggtggtctggcggcactgctg
gcggtgctgatcgtcatctacgaactgggtctgcgctaccggaccgtggaaatcacgcgg
gtcggccagctcatgctcaaagacatgcgccgcgacattttcacgcatatccagaccctg
ccgttcagctatttcgattcgcggcctcacggcaagattctgatccgcgtggtcaactat
gtgaacacgctttcggatacgttgagctccggtctgatcaatgtgatctccgatgtgttc
acgttcctgatcacgttggtggtcatgttcgtggtcgactggcgtcttgcgctgttcagc
cttgtgctgttcccgttcctgatcgcatgggtgctggtattgcagcattttcagcgtcgt
gcctatcaggtgctgtccaacaagcagagcaatctcaacgcatatatccacgagtcgatc
gccggtgtgaagaccacgcagacctttgcgcaggaagcggcgcagttcaagaccttccag
gagcagcagaacgatgtgcgtgcctcgtggatgaaggctgtgcacatccagttcctcatg
tggccgggcatccagacgatttccgtcatgaccatcgcgttcatctactatgtgggcgtt
accggcttcggtgcggtgaacgtcaccacgggtgtgctcattgcgttcgtcggctatgcg
aacaacttctggaacccggtgatcagcatcggcaacttctacaaccagctgatcacttgt
tccgcctatcttgagcgcatcttcgaaacgctcgacgtccagccggagattcgtaatgcg
ccggatgccaaggatctgccgcagatcgaaggtcgcgtcgacttcaacgacgtggtcttc
cgctatgaaccggacggccgtaacatcctcaacctggtcgatctgcatgtcgagccgggg
cgtacgatcgcgctggtcggcccgaccggtgccggcaaaaccacgatcatcaacctgctg
tcacgcttctatgatgttgcggaaggttcggttacgattgacggctatgacgtgcgtgat
gtgacgttggagtcgttgcgccgtcagatgggtgtgatgttgcaggatacgttcatcttc
tccggcaatgtgcgcgataacatccgctatggcaagctcgatgcgaccgatgccgagatc
gaggcggccgcccgtgcggtgcatgcgcacgagttcatcatggatctgcccgatggatat
gacacggtggtggaggagcgtggttcgacgttgtcggcgggccagcgtcagcttatcgcg
ttcgcgcgcgtactactcgccgatccgcggatcctgatccttgacgaggccacttcgaat
atcgatacgcgcaccgaggaggcgttgcaggccggtctcaaccacctgctcaaggggcgt
acgagcttcatcattgcgcatcgcctgtctaccatcgagaatgcggacgagatctgctat
atcgaccacggtcagattgtcgagcacggcaaccatgaggagctgctggctcggaagggc
gcgtattaccgcctctatgagtcgcaatacgccatgatcaaggtctga
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