Bifidobacterium dentium JCM 1195 = DSM 20436: BBDE_2008
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Entry
BBDE_2008 CDS
T04222
Name
(GenBank) putative ABC transporter ATP-binding component
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
bdn
Bifidobacterium dentium JCM 1195 = DSM 20436
Pathway
bdn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bdn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BBDE_2008
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bdn02000
]
BBDE_2008
Transporters [BR:
bdn02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
BBDE_2008
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
AAA_22
TniB
AAA
AAA_28
AAA_29
Motif
Other DBs
NCBI-ProteinID:
BAQ28002
LinkDB
All DBs
Position
complement(2441192..2442196)
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AA seq
334 aa
AA seq
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MDAITITDVTKRFGSFLAIDNLDMSIREGEFFSMLGPSGSGKTTTLRLIAGFEKPTSGTI
ELAGENVTDKAPFERNVNTVFQDYALFPHMSVVDNVAYGLKVHGVDHAERYDRAHKMLDL
VQLDSKANNKPRELSGGQQQRVALARALVLEPKVLLLDEPLSALDMKLRQQMQVELKQLQ
RDLHITFVFVTHDQQEAMVMSDRIAVFNKGRVQQIGTPAEIYNHPANSFVASFVGTMNFI
PETIVMANGFSAGSYTVRPERIVFVDADDDPDMVTVEGQVTDCIYLGTEYRILIKLATRE
TFTVVRPVGETVPERGENIRLAWRKNDQILLEEH
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaattacaattactgacgtcaccaaaagattcggctctttccttgccattgac
aatcttgatatgtccattagggaaggcgagtttttctccatgctcggcccctccggttca
ggaaagaccacaacgcttcgtctcatcgcaggattcgagaagccgaccagcggaaccatt
gaactcgccggggagaatgtgactgacaaggctccgttcgagcgcaacgtgaataccgtg
ttccaggactatgcgctgttcccgcatatgagcgtcgttgacaacgtggcgtacggtctg
aaggtgcatggggtcgatcatgcggaacgttacgatcgcgcccacaagatgctcgatctg
gtacagctcgattccaaagcgaataacaaaccaagggagctttccggaggacagcagcag
cgcgtggccctggcccgagcgttggtgcttgaaccaaaggtgctgttgcttgacgagccg
ctgtcggcattggatatgaaactgcgccagcagatgcaggtggagctcaagcaactgcag
cgagacctgcacattaccttcgtattcgtcacccatgatcaacaggaggccatggtgatg
agcgaccgaatcgcggtcttcaacaagggtcgcgtgcagcagataggcactccggcggag
atctacaatcatccggcgaacagttttgttgcgagctttgtgggaacaatgaatttcatt
ccggaaacgattgttatggcgaacgggttctctgccggtagctataccgtacgtccggaa
cgtatcgtcttcgtcgatgctgacgacgatcccgatatggtcacggtcgagggacaggtg
actgattgcatctacttgggtacggaatatcgaattcttatcaagctcgcgactcgtgaa
acattcacggtcgtacgtcctgtaggcgagacggtaccggagaggggggagaacatcaga
ctcgcatggcgtaagaacgatcagattctactggaggagcactga
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