Bifidobacterium dentium JCM 1195 = DSM 20436: BBDE_2109
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Entry
BBDE_2109 CDS
T04222
Name
(GenBank) putative amidase
KO
K01426
amidase [EC:
3.5.1.4
]
Organism
bdn
Bifidobacterium dentium JCM 1195 = DSM 20436
Pathway
bdn00330
Arginine and proline metabolism
bdn00360
Phenylalanine metabolism
bdn00380
Tryptophan metabolism
bdn00643
Styrene degradation
bdn01100
Metabolic pathways
bdn01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
bdn00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
BBDE_2109
00360 Phenylalanine metabolism
BBDE_2109
00380 Tryptophan metabolism
BBDE_2109
09111 Xenobiotics biodegradation and metabolism
00627 Aminobenzoate degradation
BBDE_2109
00643 Styrene degradation
BBDE_2109
Enzymes [BR:
bdn01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.4 amidase
BBDE_2109
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Gene cluster
GFIT
Motif
Pfam:
Amidase
AtzH-like
DUF4440
SnoaL_3
Motif
Other DBs
NCBI-ProteinID:
BAQ28103
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Position
complement(2583746..2585377)
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AA seq
543 aa
AA seq
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MICHSQRDVPRELMDAVERYEDALMRNATDILAELFADDPSGLPVTRADNAGLLNGHQQI
TEYRAQRGTAPSRVLRSRSYRMLANCAATVVATFDKDSGGVVTQTQVWQLIDGSWKIVSA
HLTYPVPAMDSRIWRVVGSPLKQGARTESSTDLPLRGLSVAVKDLYGVEGYAIGAGSEAF
LAEGIPQQHNSWPVQRLLDAGADVLGISRTDEFAYSLAGTNAHYGTPPNPQAPGRISGGS
SSGSASATALGQVDIGLGSDTGGSVRVPSSYQHLWGIRTTCGSVPMEGVLPLSQSFDTVG
WMTRTPDLLEKVAKVLITQESGVESALSGKVIWSEELMSSTNIDVSAGLHAWISRLEESA
RNATDVSLEQIRLDGILGPRFEGEGPDRLSDWLSSYKIVQGYEAWRNHGTWLARHWNTLG
ADIESRFRTASELTAENYRNAREHMDFWKTNVRSILGQSVLLVPSTSSVAPKITDSAIGG
TSIEDERTATMRLTCIAGLTGLPAVNIPIRTEDGLPCGICAVGPAGSDTELIAFARRLSE
LAA
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgatatgtcacagccagagggatgttcctcgggaactcatggatgcggtggagcgatat
gaggatgcgttgatgcgtaatgcgacggacattcttgcggaattattcgcggacgatccg
tccggattgcctgtgactcgtgccgataatgcaggtttgctgaatggacatcagcagatt
accgaatatcgtgcgcaacgtggaacggcaccaagtcgggttctgcgttcccgttcatac
cgtatgcttgcgaactgtgccgcgactgttgttgccacgtttgataaagattctggcggt
gttgtaacgcaaacgcaggtgtggcagttgattgacggctcatggaagattgtgtcggct
caccttacttaccccgttcctgccatggattcccgaatctggcgagtagtcggtagccct
ctgaagcaaggggctcgcactgaatcttcgacggatttgcccctacgaggattaagtgtg
gcggtgaaggatctctatggtgtggaaggatatgccataggggctggaagtgaggccttt
ctggcggaagggattccgcaacagcataattcctggcctgttcagcgtctgcttgatgcg
ggcgctgatgtgctaggcatttcaaggacggatgagtttgcctattcccttgccggtacg
aatgcccattatgggactccgccgaatccgcaggctccgggccggatttctggaggatct
tcatcggggtccgcttccgccaccgctttaggccaagttgatataggtttgggaagcgat
acgggaggttcggtgcgtgtgccttcctcttatcaacacttatgggggattcgaaccaca
tgcggttcggttccgatggaaggcgttcttccgctctcccagtcattcgataccgtggga
tggatgaccagaacccctgatttgctggagaaggtcgcaaaggtcctgataacacaggaa
tctggtgtggaatcagcactatctgggaaagttatctggtctgaagagttgatgtcatcc
acaaacatcgatgtatcggcaggtttgcatgcatggatcagtcggctggaagagtctgcc
cggaatgcaacggatgtgagtctagaacaaattcgtctcgatggcatcctagggccacgt
ttcgagggagaggggccggaccgactgtcagactggctttcttcctacaaaatcgtgcaa
ggatacgaggcgtggcggaatcatggtacttggcttgcacggcattggaacactttgggt
gctgatattgagtctcgcttcagaacggccagcgagctgacggccgaaaactaccggaac
gcccgcgaacatatggacttttggaagactaatgtgcggtccatattggggcaaagcgtt
ttattggttccttcaacttccagtgttgccccgaaaatcactgattcggcgattggtggc
acttcgattgaagatgagagaactgcgacgatgcgtcttacgtgcatcgcaggtttgacg
ggattgcctgccgtaaacattccaattcgtacggaagatggtcttccatgtggtatttgc
gcagtcggccccgccggaagcgatactgaactaattgccttcgcccgtaggctcagtgaa
ttggctgcataa
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