Phocaeicola dorei HS1_L_1_B_010: EL88_01440
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Entry
EL88_01440 CDS
T03262
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bdo
Phocaeicola dorei HS1_L_1_B_010
Brite
KEGG Orthology (KO) [BR:
bdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bdo03032
]
EL88_01440
03400 DNA repair and recombination proteins [BR:
bdo03400
]
EL88_01440
Enzymes [BR:
bdo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EL88_01440
DNA replication proteins [BR:
bdo03032
]
Prokaryotic type
DNA Topoisomerases
EL88_01440
DNA repair and recombination proteins [BR:
bdo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EL88_01440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
AII61931
LinkDB
All DBs
Position
complement(372281..374719)
Genome browser
AA seq
812 aa
AA seq
DB search
MQKNLVIVESPAKAKTIEKFLGNDYKVLSSYGHIRDLKKKEFSIDVENGFEPTYEIPADK
KKLVAELKAEAKKADMVWLASDEDREGEAISWHLFEVLGLDPEKTKRIVFHEITKTAILK
AIENPRDIDVNLVNAQQARRILDRIVGFELSPVLWKKVKPALSAGRVQSVAVRLIVERER
EVHAFVSEPSYRVTAVFEVPDVDGNEVEVKAELSNRFKTKEEAQTFLETCKDAQFSIEDI
ITRPVKKSPAAPFTTSTLQQEAARKLEFTVAQTMMVAQRLYENGQITYMRTDSVNLSDLA
LNTSKQTILSLMGERYVKVRKFATKTKGAQEAHEAIRPTYMENETVSGTGQEQKLYELIW
KRTIASQMADAELEKTTATIVISNSSEKFIATGEVITFDGFLRVYKESYDDDNEQEDEGR
LLPPLSKGEKLIRKEILATQRFTQCPPRYTEASLVRKLEELGIGRPSTYAPTISTVQQRG
YVEKGNSEGVKRPYDTLKLKGGKITEITKTEITGNEKAKLLPTDTGIVVNDFLMEYFPEI
MDFNFTANVEKEFDEVAEGEKEWTGMMDSFYKGFHPLVDKTIHSKTEHKVGERVLGTDPV
SGKPVSVKIGRFGPVIQIGTADDEEKPRFAQLAKGLSMETITLEEALDAFKLPRTLGDYD
GHTVTVGVGRFGPYVRYDKLFVSIPKGTDPMEISLDEAVELIKNKIEAQEKKFIKVFDAD
PDMQVLNGRYGPYISYQKKNYKIPENVEPADLSLEACFKVIELQKSKAETRKTKAASRNR
GTVNMEEESEKTEESAKSKAAPKVKGTAKAKK
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaaatctagtaatagttgagtcacccgctaaggctaaaaccattgagaaattc
ttgggtaatgattataaagtcctttccagttacgggcatatccgggatttgaaaaagaag
gagtttagtatcgatgtagagaatgggtttgagccgacttacgagataccggcagacaaa
aagaaattggtagccgaattgaaagcggaggcaaagaaagctgatatggtatggcttgca
tccgatgaggatcgtgaaggagaagctatttcatggcacttgtttgaagtcttggggttg
gaccctgagaagaccaagcgcattgtattccacgagataaccaaaacagcgatactaaag
gccatcgaaaatccgcgtgacattgatgtaaatctggtaaatgcccagcaagcacgccgt
attctggatagaattgtaggttttgaactttcaccggtattgtggaagaaggtaaagcct
gctctttctgccggacgtgtgcaatctgttgccgttcgtttgattgtggaacgtgaacgt
gaggtacatgcttttgtcagtgaaccgtcttatcgcgttacagcagtgtttgaagttcct
gatgttgatggaaatgaagttgaagtgaaagcagaattgtccaaccgtttcaagaccaag
gaggaagcacagactttccttgaaacttgtaaggatgcgcagttctctattgaagatata
ataacccgccctgtgaagaaatcgccggcggcaccgtttactacttctacgttgcagcag
gaagctgcccgtaagttggaatttacagtagcgcagaccatgatggtggcacagcgtctg
tatgaaaacggacaaattacttatatgcgtacggattcggtgaacctttcggatttggct
ttgaatactagcaagcagactattttgtccctgatgggagaaagatatgtcaaagtccgt
aagtttgccaccaagactaaaggagcacaggaagcgcatgaggctatccgtcctacctat
atggagaatgagacggtgagcggaaccggtcaggaacagaaattgtatgaactgatctgg
aaacgtaccatcgcttcacagatggcagatgcggaactggagaaaacaacggctactatt
gtaattagtaacagcagcgagaaatttatcgctaccggcgaggtgattacttttgacggt
ttcctgcgtgtatataaggaatcatatgatgatgacaatgagcaggaggatgagggtcgt
ctgttgccgcctctaagcaaaggggaaaaactgataagaaaagaaattttggcaactcaa
cgctttacccaatgtccgccccgttatacggaagccagcctggtacgcaaactggaagag
ttgggcatcggtcgtccatctacatacgcacctaccatttctactgtgcaacaacgcggt
tatgtagaaaaaggaaacagtgaaggtgtgaaacgtccgtatgataccttgaaactgaaa
ggcggcaagattacggaaattaccaagacagagattacgggaaatgaaaaggccaagttg
ttacctactgataccggtatcgtggtaaacgatttcctgatggaatacttccctgaaatc
atggactttaactttacagcgaatgtggagaaagagttcgatgaagtggctgaaggagaa
aaggaatggactggtatgatggacagtttctataaaggtttccatccgttggtagataag
accattcactctaagactgagcataaggtgggtgaaagagtattggggacagatcctgta
agcggtaagccggtatcggttaagataggtcgtttcggtccggttattcagattggtact
gccgatgatgaagagaaaccgcgttttgcgcagttggcaaagggattgtctatggaaacc
attacgttggaagaagcgttggatgcgttcaagcttccccgtacgttgggggattatgac
ggtcacacggtgacggtaggagtagggcgtttcggaccatacgtgcgctatgacaaactg
tttgtttctattcctaaaggaacggacccgatggagatttctttggatgaagcggtcgaa
ctgatcaagaataagatagaagcgcaggagaagaagtttattaaagtattcgatgctgac
cctgatatgcaggtcttgaacggacgttacggcccatacatcagctatcagaaaaagaat
tataagatccctgagaatgtagaaccggcggatttaagtctggaggcttgttttaaggtg
attgaattgcagaaaagcaaggcggaaacccgtaaaacgaaagcggcttcaagaaacagg
ggaaccgtaaatatggaagaggagtccgaaaaaaccgaagaatccgctaaaagtaaggcg
gctcccaaggtaaagggcactgcaaaagcaaaaaaatga
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