Phocaeicola dorei HS1_L_1_B_010: EL88_03695
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Entry
EL88_03695 CDS
T03262
Name
(GenBank) RNA polymerase sigma 70
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bdo
Phocaeicola dorei HS1_L_1_B_010
Pathway
bdo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bdo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EL88_03695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdo03021
]
EL88_03695
Transcription machinery [BR:
bdo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EL88_03695
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
HTH_30
GerE
HTH_28
Sigma70_ECF
BET
RsgI_M
Pallilysin
HTH_1
HTH_10
DUF2999
Tn7_Tnp_TnsA_C
SieB
TAM12
Motif
Other DBs
NCBI-ProteinID:
AII62322
LinkDB
All DBs
Position
859600..860166
Genome browser
AA seq
188 aa
AA seq
DB search
MVINLKDNSEKDKYILELFRTSPKEAFRLLFDAYHMKLCIYAVQLTDSFEMAEDIVQDFF
IYFWEKKYYLKINQNLRYYLYLSVRNAAINTLQKNNMLSMEELSGLDMSIPEESIDEEEQ
EERNKLLLEKLQKLPRQELQVVRAVIMENKKYKEAAEELHISVNTLKTHLTRALRQLRKE
YNLHSLFY
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atggtgataaatttaaaagataatagcgaaaaggataagtatatcttggagttgttccgg
acatctcccaaggaggcttttcgtttattatttgatgcttatcacatgaaattatgtata
tatgcagtgcaactgaccgattcttttgagatggctgaagatattgtgcaggatttcttt
atctatttttgggagaagaaatattacttgaaaataaatcaaaatcttcgttactatctt
tatttgtctgtgcggaatgcggcaatcaatactttacagaaaaataacatgttatctatg
gaggaactctcaggtcttgatatgagtattcctgaagagtctatagatgaagaggagcaa
gaggaacgaaataagttattattggaaaaattacaaaaattacctcgtcaggaattacaa
gtagtgagagctgtcattatggaaaataagaaatataaagaagcggctgaagaactccat
atttctgtgaataccctaaaaactcatctgacaagagccttgagacaattaagaaaagaa
tacaatctacactcactgttttactaa
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