Phocaeicola dorei HS1_L_1_B_010: EL88_04160
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Entry
EL88_04160 CDS
T03262
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bdo
Phocaeicola dorei HS1_L_1_B_010
Pathway
bdo03030
DNA replication
bdo03430
Mismatch repair
bdo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bdo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EL88_04160
03430 Mismatch repair
EL88_04160
03440 Homologous recombination
EL88_04160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bdo03032
]
EL88_04160
03400 DNA repair and recombination proteins [BR:
bdo03400
]
EL88_04160
Enzymes [BR:
bdo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EL88_04160
DNA replication proteins [BR:
bdo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EL88_04160
DNA repair and recombination proteins [BR:
bdo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EL88_04160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
AAA_14
DNA_pol3_gamma3
DNA_pol3_delta_C
AAA_5
AAA_30
RCF1-5-like_lid
AAA_24
AAA_16
Mg_chelatase
AAA_19
AAA_2
Rad17
AAA_18
AAA_assoc_2
RNA_helicase
ABC_tran
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AII62403
UniProt:
A0A076J755
LinkDB
All DBs
Position
complement(959165..960976)
Genome browser
AA seq
603 aa
AA seq
DB search
MENYIVSARKYRPATFESVVGQRALTITLKNAIATGKLAHAYLFCGPRGVGKTTCARIFA
KTINCQTPTAEGEACNQCESCLAFNEQRSYNIHELDAASNNSVEDIRSLIEQVRIPPQIG
KYKVYIIDEVHMLSQAAFNAFLKTLEEPPHHAIFILATTEKHKILPTILSRCQIYDFNRI
GIKDTIDHLQYVAKLEHINAEPEALTVIAQKADGGMRDALSIFDQVVSFTGGNITYKSVI
ENLNVLDYEYYFKLTDLLLENKVPESMLLFNDVLKKGFDGSHFITGLSSHFRDLLVSKDP
STLQLLEVGAGIRDRYKEQAQKCDQKFLYRAMKLCNDCDLNYRASKNKRLLVELTLIQCA
QLTLPDADDVSGGRGPKKILKPLFTQQAASTAATQPQPQAKAAAAQTAATAVPQPQGTST
AGSMNASRPSPLPQTREEKKIPVFKAGSLGISLRRPLHEQQAAEKQEAKAASTAVQNDAT
YEDYIFNEKDLDYYWREFAAALPKEEKANSARMMNMHPHLLNDTTFEVTVDNDMVEKYMV
QLIPSVQNHLRERLHNRKITMTVRVSAPTENIRAYSHVERFQMMSKKNPNLLKLKEALGL
ELS
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggaaaattatatcgtatcggcacgaaaatatcgtcccgctacattcgaatcggttgtg
ggacaacgcgcgttgaccatcaccttaaaaaatgctattgccaccggcaagctggcacat
gcctacctgttctgcggaccgcgtggagtgggaaaaacaacgtgtgcacgtatctttgcc
aaaaccatcaactgccagacccccactgccgaaggcgaagcctgcaatcagtgtgagtct
tgtctggcattcaacgaacagcgttcttacaacatacatgagctggatgccgccagcaac
aactcggtagaagatatccgttcgctgattgagcaggtacgtatcccgccacaaatcggc
aagtacaaggtatatatcattgatgaggtccacatgttgtcgcaagccgccttcaatgct
tttctgaaaacattggaagaaccgcctcatcatgccatcttcatccttgccacaacggaa
aagcataagatactgccgactattctgagccgttgccagatttatgacttcaaccgcatc
ggcatcaaagacactatcgaccatctgcaatacgttgccaaactggaacatatcaacgcc
gaacccgaagccctgactgtcatcgcacagaaagccgacggtggtatgcgcgacgctctt
tccatcttcgaccaagtagtcagcttcacaggtgggaacatcacttacaaaagtgtgatt
gaaaacctgaatgtcttggattacgaatattatttcaagctgaccgatttgttgcttgaa
aacaaagttcccgaatccatgctgctttttaacgacgtattgaaaaaaggatttgacggc
agccatttcatcaccggactatcctctcatttccgggatttgctggtgagcaaggatcct
tccaccctgcaattgctggaagtaggcgccggtatccgagaccgctataaagaacaagca
caaaaatgtgaccagaaattcctgtaccgtgccatgaagctatgcaatgattgtgacctg
aactatcgtgcaagcaaaaacaaacgtctgctggtagaactgacactgattcaatgcgcc
caactcactctgcccgacgccgatgatgtaagtggtgggcgtggccctaagaagatatta
aaacccctatttacgcagcaagcggcttccacagccgccacgcagccacagcctcaggct
aaagctgccgctgcacagaccgcagcaaccgccgttcctcaaccacagggtacaagtaca
gccggcagtatgaacgcaagccgtccaagcccgctgcctcagaccagagaagagaaaaaa
atcccggtgttcaaggcgggctcactcggtatatccctgcgtcgtcctttgcacgaacag
caagctgcggaaaagcaagaagcaaaagcggcaagcaccgctgtccaaaacgatgccaca
tacgaagattatattttcaatgaaaaagatctggactattactggcgtgaatttgcagcc
gccctgcccaaggaagagaaggctaactccgcacgaatgatgaacatgcatccgcatttg
ttgaatgacacgacttttgaagtgacagtagacaatgatatggtggaaaaatatatggta
caattgataccatcggttcagaatcatttacgcgaacgactgcacaaccggaaaatcacc
atgacggtacgtgtcagtgcccctaccgagaacatccgtgcttacagccatgtggaacgt
ttccagatgatgagcaagaaaaacccgaatctgctgaaattaaaagaagcactgggattg
gagttatcataa
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