Phocaeicola dorei HS1_L_1_B_010: EL88_05670
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Entry
EL88_05670 CDS
T03262
Name
(GenBank) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
bdo
Phocaeicola dorei HS1_L_1_B_010
Brite
KEGG Orthology (KO) [BR:
bdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bdo03016
]
EL88_05670
Enzymes [BR:
bdo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
EL88_05670
Transfer RNA biogenesis [BR:
bdo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EL88_05670
Prokaryotic type
EL88_05670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
RRP40_S1
Motif
Other DBs
NCBI-ProteinID:
AII62684
UniProt:
A0A076IRA9
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All DBs
Position
1284896..1285699
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AA seq
267 aa
AA seq
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MNFHLVRGFTMRYFIYLAYDGTNYHGWQIQPNGDSVQETLMRAFSTFLRQEIEVVGAGRT
DAGVHARLMVAHFDYDQELDCVQITEKLNRLLPSDIAVYDVKRVKDDAHARFDATYRTYK
YYVTIRKDPFNRHYAWRLFNSLDFEKMNEAARVLFDYTDFTSFSKLHTDVKTNNCRIMYA
EWTRVSGTEWVFTIKADRFLRNMVRAVVGTLVEVGRGKMTLDGFRKVIENKDRCSAGSSV
PGHALFLVDVGYPEELFIVSPSDISNT
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
ttgaattttcacttggttagaggctttacgatgcggtatttcatatatttggcttatgat
gggacaaattatcacggttggcagattcagcccaatggtgacagtgtacaggaaacatta
atgcgtgctttttctacttttctccgtcaagaaatagaggtagtgggagcaggacgtact
gatgccggcgtgcatgcacgtctcatggtcgcgcattttgattatgaccaggagttggat
tgtgttcagataacggagaaattgaatcgcttgcttccttccgatatagcggtttacgat
gtgaagcgggtgaaggatgatgcgcatgcccgttttgacgcgacttatcgtacttataag
tattatgtgactatccggaaagatccgtttaaccgtcattatgcttggaggctttttaat
tcattggattttgagaaaatgaatgaggctgcccgtgtattgtttgattatactgatttt
accagtttcagtaaattgcatactgatgtgaagacgaataattgccggattatgtatgct
gaatggacgcgggtgagtggaacagaatgggtatttactattaaagccgaccgtttttta
cggaatatggtaagggctgtggtaggtacgctggtggaagtggggcgtggtaaaatgact
ttagatgggttcaggaaggtgatagagaataaagatcgttgtagtgccggtagttctgtg
ccgggacatgccttgtttttagtagatgtgggatatccggaagaactgtttattgtttct
ccgtcagatatttccaatacctga
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