Phocaeicola dorei HS1_L_1_B_010: EL88_08625
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Entry
EL88_08625 CDS
T03262
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
bdo
Phocaeicola dorei HS1_L_1_B_010
Pathway
bdo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bdo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EL88_08625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdo03400
]
EL88_08625
DNA repair and recombination proteins [BR:
bdo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EL88_08625
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EL88_08625
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
PIP5K
Kinesin
ABC_transp_aux
AAA_16
DUF87
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AII63232
UniProt:
A0A076JA10
LinkDB
All DBs
Position
complement(1960629..1962662)
Genome browser
AA seq
677 aa
AA seq
DB search
MNFELISEYQPTGDQPEAIAQLTEGVLEGVPAQTLLGVTGSGKTFTIANVIKNINKPTLI
LSHNKTLAAQLYGEFKSFFPNNAVEYYVSYYDYYQPEAYLPSSDTYIEKDLAINEEIDKL
RLAATSALLSGRKDVVVVSSVSCIYGMGNPSDFYNNVIEIKKGKLLDRNVFLRRLVDSLY
VRNDIELNRGNFRVKGDTVDIYLAYSDNLLRVMFWDDEIDAIEEIDPVSGIRLATFDEYK
IYPANLFMTTKESQLRAIHQIEDDLTKEVAKFEEEGKMYEAKRLYERVTYDMEMIRELGH
CSGIENYSRYFDGRNAGTRPYCLLDFFPDDFLIVIDESHVSVPQIRAMYGGDRARKTNLV
EYGFRMESAFDNRPLKFEEFKELAKQVIYVSATPADYELVESEGIIVEQVIRPTGLLDPV
IEVRPSLNQIDDLMEEIQQRIEKEERVLVTTLTKRMAEELTEYLLRNDIRCNYIHSDVDT
LERVKIMDELRQGVYDVLVGVNLLREGLDLPEVSLVAILDADKEGFLRSHRSLTQTAGRA
ARNINGKVIMYADRMTDSMKKTIDETNRRREKQLAYNEEHGITPKQIQRARNAALLGNNS
NEAAGTTQGSKAYIEPSSNTMAADPIVQYMTKPQMEKTIERTRKLMQEAAKKLEFIEAAQ
YRDELLKLEDMMKERWG
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgaattgatttccgaataccaacccaccggcgaccaaccggaagctatcgcc
cagctaaccgagggagtgctggaaggagtccccgcacaaactttattgggggttaccggg
tccggcaagactttcacgattgcaaatgtaattaaaaacatcaataaacccaccttgata
ttaagccataacaaaacattggcggcccagttatacggagagttcaagagtttctttccc
aacaatgcagtggaatactatgtatcttattatgactattaccagccggaagcatacctg
ccgtccagcgacacctatatagaaaaggatctggccattaatgaagagattgacaaattg
cggctggctgccacctctgccctgctgtcgggacggaaggacgtggtggtggtgtcttcc
gtgtcctgcatctacggtatggggaacccgtcggatttctataataatgtaattgagata
aaaaaaggcaaactgctggacagaaatgtatttttacgccgtttggtggacagcctgtat
gtgcgtaacgatatagagctgaatcgcgggaatttccgcgtaaaaggtgacacggtagac
atttacctggcatatagcgacaatctcctccgggttatgttttgggacgacgaaattgat
gccattgaagagatcgaccctgtttcgggaatccgtctggctacttttgatgaatacaaa
atttatccggccaatctttttatgaccaccaaagagagccagttgagagctattcatcag
attgaggacgacttgacgaaagaggtggccaaattcgaggaggaaggaaaaatgtatgag
gcgaaacgactctatgagcgcgtgacatacgatatggagatgattcgcgaactggggcac
tgttcgggcatagaaaattattcccgctactttgacgggcgtaatgcaggtacccgtcct
tactgtctgctggacttttttccggatgatttcctgattgtaatagacgaaagccatgtc
agcgtaccgcaaatacgtgccatgtatggtggtgaccgggccagaaaaaccaatttggtg
gaatatggtttccggatggagtcggcttttgacaaccgccctctaaaatttgaagagttc
aaggaactggccaagcaagtgatttatgtcagtgctacacctgccgattatgaattggtg
gaaagtgaaggcattatcgttgaacaggttatccgtcctaccggactgctggacccggta
attgaagtacgccccagtctgaatcagattgatgacctgatggaagagatacagcaacgc
atcgagaaagaagaacgtgtactggtgaccacgctcaccaaacgcatggcagaagaattg
accgaatatctgctgcgcaatgacatccgctgcaactacatccacagcgatgtggacact
ttggaacgcgttaagattatggatgaattacgtcagggcgtttatgatgtactggtgggt
gtgaacttgcttcgtgaaggtctggacttgcccgaagtgtctttggtcgccattctggat
gcagacaaagaagggttcctccgttcccaccgttcgctgacccagacagcaggacgcgcc
gcccgcaatatcaatggaaaagtaatcatgtatgcagaccgcatgacggacagcatgaaa
aaaacgatagacgaaaccaaccgtcgtcgcgaaaaacagctggcatataacgaagagcat
ggaatcacccccaaacaaatacagcgtgcgcgtaatgctgccttgttgggcaacaacagc
aacgaagcggcgggaaccactcaaggctccaaggcatatattgagccatcttccaataca
atggctgccgacccgattgttcagtatatgaccaagccacagatggagaaaacgatagaa
cgtacccggaaactgatgcaggaagctgccaagaagctggaatttatagaagctgcacag
tatagggatgaattgctgaaactggaagatatgatgaaagagagatgggggtag
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