Phocaeicola dorei HS1_L_1_B_010: EL88_10050
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Entry
EL88_10050 CDS
T03262
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bdo
Phocaeicola dorei HS1_L_1_B_010
Pathway
bdo00260
Glycine, serine and threonine metabolism
bdo00460
Cyanoamino acid metabolism
bdo00630
Glyoxylate and dicarboxylate metabolism
bdo00670
One carbon pool by folate
bdo00680
Methane metabolism
bdo01100
Metabolic pathways
bdo01110
Biosynthesis of secondary metabolites
bdo01120
Microbial metabolism in diverse environments
bdo01200
Carbon metabolism
bdo01230
Biosynthesis of amino acids
bdo01240
Biosynthesis of cofactors
bdo04981
Folate transport and metabolism
Module
bdo_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
bdo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
EL88_10050 (glyA)
09102 Energy metabolism
00680 Methane metabolism
EL88_10050 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
EL88_10050 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
EL88_10050 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
EL88_10050 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
EL88_10050 (glyA)
Enzymes [BR:
bdo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
EL88_10050 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AII63495
UniProt:
A0A076J5L7
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All DBs
Position
2272112..2273392
Genome browser
AA seq
426 aa
AA seq
DB search
MKRDDLIFDIIEKEHQRQLKGIELIASENFVSDQVMQAMGSCLTNKYAEGYPGKRYYGGC
EVVDQSEQIAIDRLKQIFGAEWANVQPHSGAQANAAVFLAVLNPGDKFMGLNLAHGGHLS
HGSLVNTSGIIYTPCEYNLNKETGRVDYDQMEEIALREKPKMIIGGGSAYSREWDYKRMR
EIADKIGAILMIDMAHPAGLIAAGLLDNPVKYAHIVTSTTHKTLRGPRGGVIMMGKDFPN
PWGKKTPKGEIKMMSQLLDSAVFPGIQGGPLEHVIAAKAVAFGECLQPEYKEYQTQVKKN
AAVLAQALIDRGFTIVSGGTDNHSMLVDLRTKYPDLTGKVAEKALVAADITVNKNMVPFD
SRSAFQTSGIRLGTPAITTRGAKEDLMLEIAEMIETVLSNVDNEEVIAQVRARVNETMKK
YPIFAY
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagagacgatttgattttcgacattatcgaaaaagagcatcaacgccagctcaaa
ggtatcgagctgatcgcatccgaaaactttgttagtgaccaagtaatgcaagctatgggt
tcttgccttaccaacaagtatgctgaagggtatcccggcaagcgctactatggcggttgc
gaagtggtagaccagagcgaacaaatcgctatcgacagactgaaacaaatcttcggcgca
gaatgggctaacgtacaacctcactcaggagcacaggctaatgctgccgtattcttggcc
gttttaaatccgggtgataaattcatgggattaaatctggctcatggtggccacctgtca
catggttcattggttaacacatccggcattatctatactccatgtgaatacaatctgaac
aaggaaacaggacgtgtggattacgaccagatggaagaaatcgcattacgtgaaaaaccg
aaaatgattattggtggcggttcagcatattctcgtgaatgggactacaaacgtatgcgc
gaaatcgcagataaaataggagctatcctgatgatcgatatggctcatcctgcaggtctg
attgctgccggactgctggataatccggttaaatacgctcatatcgttacttcaacaacg
cataagacccttcgcggtcctcgtggcggtgttatcatgatgggcaaagatttccctaat
ccatggggcaagaaaactccgaaaggcgaaatcaagatgatgtcacaacttttggattct
gctgtattccctggtatacaaggtggtccgttggaacatgtcattgcagccaaagctgtt
gcattcggtgaatgtttacagccggaatacaaagaatatcaaacacaagtaaaaaagaat
gcagccgtattggcacaggctctgattgaccgtggttttacgatcgtttctggtggtaca
gacaaccactccatgctggtagaccttcgcaccaaataccctgatctgacaggcaaagta
gcagaaaaagcattggttgctgctgatatcactgtaaacaagaatatggtcccatttgac
agccgttctgctttccaaacttcaggtatccgtttgggaactcctgccatcacaactcgt
ggcgcaaaagaagacttgatgttggaaatcgccgaaatgattgaaactgttctttcaaac
gtagacaatgaagaagtgattgcacaagttcgtgcacgcgtaaacgaaacaatgaagaaa
tatcctattttcgcttactaa
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