Phocaeicola dorei HS1_L_1_B_010: EL88_10530
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Entry
EL88_10530 CDS
T03262
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bdo
Phocaeicola dorei HS1_L_1_B_010
Pathway
bdo03420
Nucleotide excision repair
bdo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bdo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EL88_10530
03430 Mismatch repair
EL88_10530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdo03400
]
EL88_10530
Enzymes [BR:
bdo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EL88_10530
DNA repair and recombination proteins [BR:
bdo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EL88_10530
MMR (mismatch excision repair)
Other MMR factors
EL88_10530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
AAA_12
AAA_11
DUF6094
ResIII
Motif
Other DBs
NCBI-ProteinID:
AII63580
UniProt:
A0AA37NKU0
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All DBs
Position
complement(2386591..2388981)
Genome browser
AA seq
796 aa
AA seq
DB search
MTNYLEELNESQRDAVLYNEGPSLVIAGAGSGKTRVLTYKIAYLLEQGYTPWSILALTFT
NKAAREMKERIARQVGDQARYLWMGTFHSIFSRILRCEAQVIGFSSNFTIYDSSDSKSLI
KSIVKEMQLDDKTYKSGLIQARISNAKNHLVFPDAYVSNAELYQYDLNAKVPATRDIYRQ
YWERCRQSDAMDFDDLLLYTYMLFRDHPEICRKYAEQFRYVLVDEYQDTNFAQHSIVLQL
TQEHQRVCVVGDDAQSIYSFRGANIDNILKFTQLYKGAKLFKLEQNYRSTQTIVCAANSL
IEKNSEQIKKEVFSEKAKGEPIGVFNAYSDVEEGEIVANQIVKLRSREHYSYNDFAILYR
TNAQSRIFEEALRKRSLPYKIYGGLSFYQRKEIKDVISYFRLAVNPNDEEAFKRVLNYPV
RGIGDTTLNKVIDAAAQHHVSLWMVLEEPLAYGLNINKGMHTKLQGFRELVKSFIVEIPK
KNAYELGAMIVRQSGIMNEIYQSNDPENLSRQENIEELINGMHDFCAIREEEGNENILLT
DFLSEVSLLTDQDNEKEEDAEKITLMTIHSAKGLEFKNVFVVGLEENLFPSALSLNSYKE
LEEERRLFYVAITRAEEHCYLSFAKSRFKYGKMEFSSPSRFLKDIDVHFLKLPQEEQMAR
RIDERASRFCREQNERASRFLFDESASQPSYGRSSSNLSGGQKSFFVGERPKAEIIRPSV
PRNLTKVGLATVSKPSAAGTLPVNVLAGQVIEHERFGIGDVIKVEGTGENSKATVRFRNA
GEKQLLLKFARFKVVE
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgacgaattatttagaagaattgaatgaaagccagcgcgatgcagtgctttacaacgag
ggtccctctttggtgatagctggagcaggttcggggaaaacacgcgtgttgacttataag
atagcttatttactggagcagggatatactccttggtctattttggcattgacttttacc
aataaggctgctcgcgaaatgaaagagcgtatagcccgtcaggtgggcgatcaggcacgc
tatttatggatggggacgttccattccattttttcgcgtatcctgcggtgtgaggcacag
gttatcggctttagctccaattttaccatctatgattcttcagattcgaagagtttgatc
aagtctattgtaaaagaaatgcaattggatgataaaacctataaatcagggttgatacag
gcgcgtatcagcaatgcgaaaaatcatttggtttttcctgatgcatatgtttcgaacgca
gagctttatcagtatgatttgaatgccaaagtacccgccacccgtgatatttaccggcaa
tattgggaacgttgccgtcaaagcgatgcgatggattttgatgatttgctgctttatact
tatatgttattccgcgatcatcctgaaatttgccgtaagtatgcggagcagtttcgttat
gtgctggtggatgagtatcaggacaccaattttgcgcaacacagcattgtgcttcagctt
acccaggagcatcagcgtgtatgcgtggtgggggatgatgcgcagagtatttattccttc
cgaggggctaatattgacaatatattgaaatttactcaactgtataagggggccaagctt
tttaaactggagcagaactatcgttctacccagaccattgtgtgtgcggcaaacagcctg
atagagaaaaatagcgagcagataaagaaggaggtattttcagaaaaagcgaagggggag
cctatcggagttttcaatgcctacagtgatgtggaggaaggggagattgttgccaaccag
attgtgaaactgcgttcacgggaacattattcttataatgattttgctattttataccgt
acaaatgctcaaagccgtattttcgaggaggctttgcggaagcgtagcctaccttataaa
atttatggaggactttctttttatcaacgcaaggagattaaagacgttatttcttacttt
cgtctggcggtaaatccgaatgatgaggaggcttttaagcgggtattgaattatccggtg
cgaggaatcggggatactacgttgaacaaagttattgatgcggctgcacagcatcatgtt
agtctttggatggttttggaagagccgttggcatacggcttgaatattaacaaggggatg
cataccaagttacaggggtttcgtgaactggtaaaaagttttatagtggagatcccgaaa
aagaatgcatatgaattgggggcaatgattgttcgtcagtccggcattatgaatgagatt
tatcagagcaatgatccggaaaacctgagccgtcaggagaatattgaagaactgataaac
ggtatgcatgatttttgtgcaatccgtgaagaagaagggaatgagaacatcctgttgacg
gatttcctgtcggaggtttctctgctgacagaccaggataacgagaaagaggaggatgct
gagaagataaccttgatgaccattcactctgctaaaggcttggagtttaaaaacgttttt
gtagttgggttggaagagaacttgtttcccagtgctttgtcactcaattcgtataaggaa
ttggaagaggagcgccgcttgttttatgtggcgattacacgtgccgaggagcattgctat
ttgtcttttgccaagagccggtttaaatatggaaagatggagttcagtagcccgagccgt
ttcttgaaagatattgatgtacatttcctgaagctgcctcaggaggaacagatggcccgg
agaatagacgagagagccagccgtttctgtcgtgagcaaaatgaacgtgcgtctcgtttc
ttgtttgacgaatctgcttcgcagccttcttatgggcgttcttcatcaaatttgtctggt
ggtcagaaatcattttttgttggagaaagaccgaaagctgagattatccgtcccagtgtg
ccgcgcaatttgactaaggtaggtcttgctacggtctcaaagccgtccgcggcgggaacc
ttgccggtgaatgtgctggcagggcaggtgatagagcatgaacgctttggaataggcgat
gtgataaaagtggaaggaaccggtgagaacagcaaggcgactgtccgtttccggaatgcc
ggagagaaacaattattgctgaaattcgcccggttcaaagttgtggaataa
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