KEGG   Phocaeicola dorei HS1_L_1_B_010: EL88_11325
Entry
EL88_11325        CDS       T03262                                 
Name
(GenBank) XRE family transcriptional regulator
  KO
K18831  HTH-type transcriptional regulator / antitoxin HigA
Organism
bdo  Phocaeicola dorei HS1_L_1_B_010
Brite
KEGG Orthology (KO) [BR:bdo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:bdo03000]
    EL88_11325
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:bdo02048]
    EL88_11325
Transcription factors [BR:bdo03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    EL88_11325
Prokaryotic defense system [BR:bdo02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HigB-HigA
    EL88_11325
SSDB
Motif
Pfam: HTH_3 HTH_31 HTH_26 HTH_19 HTH_24 HTH_23 YdaS_toxin Sigma70_r4_2 HTH_38 DNA_pol3_delta_C HTH_28 Sigma70_r4 HTH_Tnp_ISL3 HTH_7
Other DBs
NCBI-ProteinID: AII63718
LinkDB
Position
complement(2557717..2558079)
AA seq 120 aa
MNKVTKEQYEFALARVEELLPLVDDKTPANDKNAVELTVMSDIVIAYEKEHYPIEKPTVA
ELIELSLEEKGMSQKQLAGEIGISPSRVNDYISGRSEPTLKIARLLCRVLNIPPAAMLGF
NT seq 363 nt   +upstreamnt  +downstreamnt
atgaataaagtaacgaaagaacagtatgaatttgctttggcgagagtggaggaacttctg
ccattggttgatgacaaaacgcctgcaaacgataaaaatgcggtggagcttacagttatg
tccgatattgtgatagcatacgaaaaagaacattatccgatagaaaaaccgactgttgcg
gaattgatagagttatctcttgaagagaaagggatgagtcaaaagcaacttgctggtgag
attggaataagtccatcgcgtgtgaatgactatatttctggacgttcggaaccgaccctc
aaaattgcgaggttgctatgtcgagtgctgaatatacctccagccgcgatgttgggtttc
tga

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