Phocaeicola dorei HS1_L_1_B_010: EL88_15955
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Entry
EL88_15955 CDS
T03262
Name
(GenBank) RNA polymerase sigma70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bdo
Phocaeicola dorei HS1_L_1_B_010
Pathway
bdo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bdo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EL88_15955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdo03021
]
EL88_15955
Transcription machinery [BR:
bdo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EL88_15955
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_1
GerE
HTH_10
HTH_Tnp_ISL3
HTH_23
HTH_30
HTH_24
Ldh_1_C
Muted
Motif
Other DBs
NCBI-ProteinID:
AII64552
LinkDB
All DBs
Position
3450933..3451499
Genome browser
AA seq
188 aa
AA seq
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MPNTAMEATELLKEIQKHDSQQAFRSLYDMYYDRFFRIAFYYLQRDEWAQEVILDVFTTL
WNHRKSQLIPDDFNKYSYILIRNAALNYLEKEQRREASPLENMPEISSSNLSPEEQMMNE
ELFNIYENSLNELPERCRTIFIKVREEKQSYASVAEELNISPKTVDAQLQKAVTRLKEKI
NNYFRNRR
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgcccaacacggcaatggaggcaactgaactactcaaagaaatacagaagcatgattcc
caacaggctttccggtctttatacgatatgtattatgaccgtttctttcgtatcgccttt
tattaccttcaacgggatgaatgggctcaagaagtaattttagatgtttttaccacgctt
tggaatcatcgaaaaagtcagcttattcccgatgattttaataagtacagctatatatta
ataagaaatgccgctctgaactatttggaaaaagaacaaaggagggaagcctcgcctctg
gaaaatatgccggaaatatcttcttccaacctttctcctgaagaacaaatgatgaatgaa
gagttatttaacatttatgagaactcactgaatgaattacctgaacgttgccgaacaatc
tttattaaagtccgcgaagaaaaacaaagttatgcttccgttgccgaagaacttaatata
agccctaaaacagtagatgcccagttacaaaaagctgtaacccgactcaaagaaaaaatt
aacaattattttagaaatagacgatag
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