Phocaeicola dorei HS1_L_1_B_010: EL88_17270
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Entry
EL88_17270 CDS
T03262
Name
(GenBank) RNA polymerase sigma70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bdo
Phocaeicola dorei HS1_L_1_B_010
Pathway
bdo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bdo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EL88_17270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdo03021
]
EL88_17270
Transcription machinery [BR:
bdo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EL88_17270
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
GerE
DUF2774
HTH_23
HTH_40
Aldo_ket_red
SusR_C
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AII64792
LinkDB
All DBs
Position
complement(3826375..3826926)
Genome browser
AA seq
183 aa
AA seq
DB search
MLNDLLTLTKIREGDIKAFEDVFRRYYSPLCWYAMSITGSMEAAEEIVEELFYGFWRDRE
RLPLFRSMKSYLYVAVRNQSFQYCEHLEVRNKYREFVLSRKGRTQDSSPQEEIEYQELRH
LIDTTLARMPERRLRIFRMHRMEGKKYAEIASQLSLSVKTVEAEMTKALKALKKEIENYI
IRT
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatgatttgttaacactgaccaaaataagggagggagatataaaggcgtttgaa
gatgtgtttcgccgttattattcccctctctgttggtatgccatgagtatcaccggcagt
atggaggctgcggaggaaatcgtagaggagttgttttatgggttttggagagatcgggag
aggctgccgttgttccgttctatgaaaagctatctttatgttgcggtgcgcaatcagtct
tttcaatattgcgagcatctggaggtgagaaacaaatatcgggagtttgttctctcgcgg
aaggggcggacacaggatagcagtcctcaagaagagatagaataccaggaattaagacat
ttgatagatactacgcttgctcggatgccggaacgaaggttgcgcatattccggatgcat
cgtatggaaggtaaaaagtatgcggaaatagcttcgcagctttctttgtcggtgaagact
gtagaggctgagatgacaaaagctcttaaagcattaaaaaaagaaattgagaattatatt
ataaggacatga
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