Phocaeicola dorei HS1_L_1_B_010: EL88_19435
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Entry
EL88_19435 CDS
T03262
Name
(GenBank) RNA polymerase
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bdo
Phocaeicola dorei HS1_L_1_B_010
Pathway
bdo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bdo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EL88_19435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdo03021
]
EL88_19435
Transcription machinery [BR:
bdo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EL88_19435
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
PhyR_sigma-like
Sigma70_ECF
HTH_10
MOLO1
UPF0122
HTH_40
HTH_24
FHIPEP
Tnp_IS481_C
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AII65193
LinkDB
All DBs
Position
4350698..4351285
Genome browser
AA seq
195 aa
AA seq
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MKSTTDIQMSKIPGNSFNDIYTSYYKKSFFFAKSYVHNDLAAEDIASEALIKLWEKLKAE
PVEEKYILPLLLTILKNKALDYLKHEEVKRSAFEVMADWQQQELSIRMSALEACNPDEIF
SEEVEKIISATLSTLSEQTRRAFILSRFENKSNKEIAEEMEISIKGVEYHISKALKVLRV
TLKDYLPLFYFFFYY
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcacaaccgatatacaaatgagcaaaatacctggaaattcttttaatgatatc
tatacctcttattataagaagtcttttttctttgccaaatcatacgttcataatgatttg
gcagcagaagatattgcctccgaggcattaataaagttgtgggaaaagttgaaggccgag
cctgttgaagagaaatatatcttaccgttattactgacaattttgaagaacaaggctttg
gactatctaaagcacgaggaggtaaaacgcagtgcttttgaagtgatggccgactggcaa
caacaggaattgtctattcgtatgtctgccttggaagcgtgcaatcctgatgagattttt
tcggaagaagtggaaaaaatcatcagtgctactttaagcaccttgtcggaacagacgcga
cgggcgtttattttgagccgttttgaaaataaatctaataaagagattgccgaagagatg
gaaatctctataaagggggtggaatatcatatatcaaaagcattgaaagtactgcgggtg
actttaaaagattatcttcctttattttatttcttcttttattattaa
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