Phocaeicola dorei HS1_L_1_B_010: EL88_22525
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Entry
EL88_22525 CDS
T03262
Name
(GenBank) RNA polymerase sigma70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bdo
Phocaeicola dorei HS1_L_1_B_010
Pathway
bdo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bdo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EL88_22525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdo03021
]
EL88_22525
Transcription machinery [BR:
bdo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EL88_22525
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
GerE
Sigma70_ECF
UPF0122
Herpes_UL32
Fv1_N
HTH_23
HTH_10
DUF1492
HTH_40
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AII65756
LinkDB
All DBs
Position
complement(5133545..5134120)
Genome browser
AA seq
191 aa
AA seq
DB search
MNEELDDTYKAVFRQCYPKLLFYATRLVGTEEAEDVVQDVFVELWRRRDSVVIGEQILAF
LYRSVYTKAINLLKHQVIENNYSAAMIEIYERKLQYYQPDHAEVIKKIENQELRQEIFEA
INELPDKCKEVFKLSYLHDMKNKEIADTLGISLRTVEAHMYKALKFLRERLSHLLLSLII
FSAKLLSVFTS
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaggaacttgatgacacctataaggccgtctttcgtcaatgctatcctaagctg
ttgttttatgcgacacggctggtcggtaccgaagaagccgaagatgtagtgcaggatgtt
tttgtggagttgtggaggcggagagattcagtcgtcataggagagcagattttagctttc
ctttatcgttctgtatataccaaggctataaatttattgaagcatcaggttatagagaac
aactacagtgcggcaatgatagaaatctatgaacgaaaattgcaatattaccagccggat
catgctgaagttattaaaaagatagagaatcaggaattacgtcaggaaatttttgaagcg
attaatgaattgccggataaatgtaaggaggtgttcaaactgagttatcttcatgatatg
aaaaacaaggaaattgctgatactcttggtatttctttacgtaccgtagaggcacatatg
tataaggccttgaaatttttgcgcgaacgtctcagccatttattattgtcattgattata
ttttcagcaaaactgctaagtgtttttacaagttga
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