Phocaeicola dorei HS1_L_1_B_010: EL88_24095
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Entry
EL88_24095 CDS
T03262
Name
(GenBank) preprotein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
bdo
Phocaeicola dorei HS1_L_1_B_010
Pathway
bdo02024
Quorum sensing
bdo03060
Protein export
bdo03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
bdo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
EL88_24095
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
EL88_24095
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EL88_24095
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
bdo02044
]
EL88_24095
Secretion system [BR:
bdo02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
EL88_24095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
Motif
Other DBs
NCBI-ProteinID:
AII66042
UniProt:
A0A076IZI2
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All DBs
Position
complement(5508624..5511611)
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AA seq
995 aa
AA seq
DB search
MQNKGFVKVFAVLLTLVCVFYLSFSFVTRYHMDKAAQDPKGEAHYLDSMQNEKVYLGSYT
LKQCREMEIGLGLDLKGGMNVILEVSVPDVVKALADNKTDEAFNKAVAEASKQSITSQDD
FITLFVKEYKKQAPNGKLAELFATQQLKDKVTTRSSDSEVEKVLREEVKAAIDNSYNVLR
TRIDRFGVAQPNIQALEGKMGRIMVELPGIKEPERVRKLLQGSANLEFWETFDAKEIVPY
LSSVDNRLRDILAVESGAASADSVAADTVAVAQASAISAADSLAAALKGETASNSAAMEQ
MKKEHPLASVLQLNPNGYGSVVGYADYKDTAQVNQYLAMKEVKEMLPKDLRLKWGVKAAD
FDKQGRIFELYAIKSTERNGRAPLEGDVITDAKDEYDQFNKPCVSMSMNTDGARRWAVLT
KNNVGKAIAIVLDGYVYSAPNVNGEITGGHSQITGNFTPEVTKDLANVLKSGKMPAPARI
VQEDIVGPSLGQESINQGIISFVVALILLMIYMCAMYGLIPGMVANCALVVNFFFTLGIL
TSFQAALTMSGIAGMVLSLGMAVDANVLIYERTKEELRAGKTVKAALADGYSNAFSAIFD
SNLTSIITGIILFYFGTGPIRGFATTLIIGILCSFFTAVFLTRIVYEHFMNKDKWLNLTF
TTGISKNLMQNVNYNFMGMMKRSFTVFGAIIVICIISFFIRGLAQSIDFTGGRNFVVQFE
QQVEPETVRDLLKKKITEDNVQAIALGTDKKTIRITTNYRINEESPTIDSEIEEFLYQSL
KDGNLLGEGTTLEIFIDRDNRVGGSIISSQKVGPSIADDIKTSAIWSVLFALVAIGLYIL
LRFRNVAYSVGATVALAVDTILIIGAYSLCYGWVPFSLEIDQTFIGAVLTAIGYSINDKV
VIFDRIREFFGLYPKRNRMQLFNDSLNTTLARTINTSLSTLIVLLCIFVLGGDSIRSFAF
AMILGVVIGTLSSIFIAAPIAYLTMGNKMPEETKA
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacaaaggatttgtaaaggtttttgcggtattactcacccttgtatgtgtgttt
tatctttctttctcttttgtgacccgctatcacatggacaaagcggcacaggacccgaaa
ggtgaagcacattaccttgattctatgcagaatgaaaaagtttatttgggtagttatacg
ctgaaacagtgtcgcgagatggagattggtctgggtctagacctgaaaggtggtatgaac
gttatccttgaagtttctgtaccggatgtagtgaaggctttggctgacaacaagactgat
gaagcttttaacaaagcggttgcagaagcatcaaaacaatctatcactagtcaggatgac
tttatcactctttttgtaaaagagtataagaaacaagctcccaatggcaaattggctgaa
ttatttgctactcagcagttgaaagacaaagtaaccacccgcagttccgacagtgaagtt
gaaaaagtattgcgcgaagaggtaaaggctgctatcgacaactcttataatgtattacgt
acacgtattgaccgttttggtgtggcacagcctaacattcaggcattggaaggaaagatg
ggccgtatcatggtggaactaccgggtatcaaagaaccggaacgtgtcagaaaactgttg
cagggatctgctaacttggaattctgggaaactttcgacgcaaaagaaatagttccttat
ctttcttctgtagataacagactgcgtgatattcttgctgttgaaagtggtgctgcttct
gctgattctgtagcagctgatactgttgctgttgcacaggcttctgcaatttctgctgcc
gacagtcttgcagccgcattgaaaggcgaaacggcaagtaactctgccgcaatggagcag
atgaagaaagaacatccgttggcttctgttcttcaattaaatccgaatggttacgggtcg
gtggtaggttatgccgattataaagatactgctcaggtaaaccagtaccttgctatgaaa
gaagtgaaagaaatgttgccgaaagatcttcgtttgaaatggggtgtaaaggctgctgat
tttgacaagcagggacgtatctttgaattgtatgctatcaagtctactgaacgtaacgga
cgtgctccgttggaaggtgatgtgatcactgatgctaaagatgaatatgaccagttcaac
aagccttgtgtcagtatgtctatgaacactgacggcgcgcgccgctgggctgttctgaca
aagaacaatgtaggcaaggctatcgctatcgtactggatggttacgtatacagcgctccg
aatgtaaacggtgaaattacgggcggacactctcagattaccggtaactttactccggag
gtgacaaaagacttggctaacgtattgaagtctggtaagatgcctgctcctgcacgtatc
gttcaggaggatatcgttggtccgtcattgggtcaggaatctatcaatcaaggtatcatt
tcatttgttgttgcgttgattctgttgatgatctatatgtgcgctatgtacggattgatt
ccgggtatggttgccaactgcgcattggttgttaacttcttcttcacattaggaatcctt
acctcgttccaagctgcactgaccatgtctggtattgccggtatggtgttgtcattgggt
atggctgtagatgctaacgtgttgatttatgaacgtacaaaagaagaattgagagccggt
aaaactgttaaggctgctttagcagacggttattctaacgcattctctgctatttttgac
tcaaacttgacatcaattatcactggtatcattctgttctatttcggtacggggccgatc
cgtggttttgccactacgttgattatcggtatcctctgctcattctttacagcagtattc
ttgactcgtattgtttatgagcacttcatgaataaagacaagtggttgaacttgacattc
actacagggatttccaagaacctgatgcagaacgtgaattacaactttatgggaatgatg
aaacgttcattcacggtattcggagcgattatcgttatctgtatcatttcattctttatc
cgtggtttggcgcagagtattgactttaccggtggacgtaacttcgtagttcagtttgaa
cagcaggttgaacctgaaacagtgcgtgacttgttgaagaagaaaatcacagaagataat
gtacaggctatcgccttgggtacggataagaagacaatccgtattacaaccaactaccgt
attaatgaagagtctcctactatcgactccgaaattgaagagttcttgtatcagtctttg
aaagatggtaacttgctgggcgaaggtactacattggaaatctttattgatcgtgataat
cgtgtcggtggttctattatcagttctcagaaagtaggtcccagtatcgctgatgatatc
aagacatcggctatttggtctgtattgtttgcactggtggctatcggtttgtatatcttg
ctgcgtttccgcaatgtagcttatagtgtgggtgcgactgttgcattggctgtcgatact
attctgattatcggtgcatactcattatgttatggatgggttccgttctcattggaaatt
gaccagaccttcattggtgccgttttgaccgctatcggttattctatcaatgacaaggtg
gttatctttgaccgtatccgtgagttcttcggtctgtatccgaaacgtaaccgtatgcag
ttgtttaacgattcactgaatactactttggctcgtaccatcaatacttcattaagtaca
ttaatcgtattgttgtgtatctttgtgctgggtggtgacagtatccgcagcttcgccttt
gcaatgattttgggcgttgtgatcggtacgttgtcttctatcttcattgctgctcctatc
gcttacctgactatgggcaacaagatgccggaagaaacaaaggcataa
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