Phocaeicola dorei HS1_L_1_B_010: EL88_24395
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Entry
EL88_24395 CDS
T03262
Name
(GenBank) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
bdo
Phocaeicola dorei HS1_L_1_B_010
Brite
KEGG Orthology (KO) [BR:
bdo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
EL88_24395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdo03019
]
EL88_24395
03009 Ribosome biogenesis [BR:
bdo03009
]
EL88_24395
03036 Chromosome and associated proteins [BR:
bdo03036
]
EL88_24395
Enzymes [BR:
bdo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
EL88_24395
Messenger RNA biogenesis [BR:
bdo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EL88_24395
Ribosome biogenesis [BR:
bdo03009
]
Eukaryotic type
90S particles
RNase
EL88_24395
Prokaryotic type
rRNA processing factors
EL88_24395
Chromosome and associated proteins [BR:
bdo03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
EL88_24395
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
AII66102
UniProt:
A0A076IZM3
LinkDB
All DBs
Position
complement(5600222..5601148)
Genome browser
AA seq
308 aa
AA seq
DB search
MFSNIKDRIRLLFRKDRESYFRFYKMLGFYPKDISIYEQALLHKSLSVKSEKGRLLNNER
LEFLGDAILDAVVADIVYKRFEGKREGFLTNTRSKIVQRETLNRLAIEIGLDKLIKYTAR
QSSHNSYMCGNAFEALVGAIYLDRGYRACKYFMEHRIIGSYINLEKISRKEVNFKSKLIE
WSQKNRFEVTFELITQSHDQGYNPTFESEVLVEGISGGKGTGYSKKESQQMAARVALGKI
KNDSGFIECIFAAKAARELSQEEVTVSDSKPSDSGVVTPDLSLEEIKKTDVVEQIISEAE
EKAFKENA
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
gtgtttagcaatataaaagataggataagacttctttttcgtaaggatagggagtcttat
tttcgtttttataagatgcttggattctatcccaaagatattagcatctacgaacaggct
ttgcttcacaaatctttatcagtgaagtctgaaaaggggcgtttgcttaataatgaacgt
ttggaatttttgggggatgctattttggatgctgtggtggcagatattgtttacaaaagg
tttgaaggaaagcgtgagggttttctcacgaacacccgttctaaaatagtgcagcgtgaa
acattgaatcgtttggctatagagattggtttggataagctgatcaagtatacagcccgc
cagtcttctcataacagctatatgtgcggcaatgcattcgaagcattggtaggtgctatt
tatttagacaggggatatcgtgcctgtaaatatttcatggagcatcgtattattggatct
tatataaatttggagaagatttcccgtaaggaggtaaattttaaatccaagttgatagaa
tggagtcaaaaaaatcgttttgaggttacctttgagctgataacccaatcacacgatcag
ggatataatcctactttcgagagtgaagttttggtggaaggtatttcgggaggaaaagga
accggttattctaaaaaagagtctcagcaaatggctgcgcgtgtggctttgggaaaaatc
aagaatgattccggttttattgaatgtatttttgcggctaaggctgcccgtgagttatct
caggaggaggtaacggtttctgatagtaagccttcagacagtggggtcgttactccggat
ctttctttggaggagattaagaaaacggatgtggttgagcagataatcagtgaagcggaa
gaaaaggcttttaaggaaaacgcttag
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