Bdellovibrio sp. qaytius: CIK05_00100
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Entry
CIK05_00100 CDS
T05880
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
bdq
Bdellovibrio sp. qaytius
Pathway
bdq00020
Citrate cycle (TCA cycle)
bdq00190
Oxidative phosphorylation
bdq00650
Butanoate metabolism
bdq00720
Other carbon fixation pathways
bdq01100
Metabolic pathways
bdq01110
Biosynthesis of secondary metabolites
bdq01120
Microbial metabolism in diverse environments
bdq01200
Carbon metabolism
Module
bdq_M00009
Citrate cycle (TCA cycle, Krebs cycle)
bdq_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bdq_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
bdq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CIK05_00100 (sdhA)
00650 Butanoate metabolism
CIK05_00100 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
CIK05_00100 (sdhA)
00720 Other carbon fixation pathways
CIK05_00100 (sdhA)
Enzymes [BR:
bdq01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
CIK05_00100 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
HI0933_like
GIDA
AlaDh_PNT_C
NAD_binding_8
FAD_binding_3
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
AZZ35269
UniProt:
A0A3T0RMH3
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All DBs
Position
20162..22078
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AA seq
638 aa
AA seq
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MSNKLDSNIPSGDIGDKWTKHKFDMKLINPANKRKLTVIVIGTGLAGASAASSLGELGYK
VKAFCVHESPRRAHSVAAQGGINAAKNYQNDGDSVYRLFYDTVKGGDFRAREANVHRLAE
VSVNIIDQAVASGVPLAREYGGLLSNRSFGGSQVSRTFYARGQTGQQLLLGAYSSMMRQV
DLGTVELYTRREMLDLVVIDGKARGVIIRNLLTGEIESHEADAVVVASGGYSNVFYLSTN
AMACAVTAAWKAHKKGAFFANPCYTQIHPTCIPVHGENQSKLTLMSESLRNDGRIWAPLK
KGDARLGKDIPEAERDYFLERIYPSFGNLAPRDVASRQAKYRVDEGHGALGEKAVFLDFK
DSINRLGEDKVAERYGNLFQMYDKITGENPYKQPMRIFPAPHYTMGGLWVDYNLQSTVPG
LFVAGEANFSDHGANRLGASALMQGLADGYFVLPYTIGNYFANTKLGKVETTNDAFKHAA
NETQTELNKFLSVKGSRSVESLHKELGHIMWEKCGMARDKAGLTEAISKIQNLRKEFHSN
VNVPGEGKGINNELEKAGRVADFIELGELMCRDALTREESCGGHFRSEYQVDGEAKRDDE
KFCHAAAWEWNGSADKTQTRHQEELTFDNVHLATRSYK
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacaaattagatagcaatattcctagtggcgatatcggcgacaaatggactaaa
cacaaattcgacatgaagctgatcaatccagcgaataaacgtaagctgactgttatcgtt
attggtacagggttggctggcgcttctgcggcatcttcacttggcgaacttggttacaaa
gtaaaagcattctgtgtgcatgaatctcctcgccgcgcccattcggtcgcagctcaaggt
ggtatcaatgccgcaaaaaattatcaaaacgatggcgattcagtttatcgtttattctat
gacactgttaagggcggagactttcgcgctcgtgaagcaaacgttcatcgtttagccgaa
gtgtctgtaaacattatcgatcaagctgttgcatcaggtgttccgttagctcgtgagtac
ggtggattattatcaaatcgttcattcggtggatcacaagtttctcgtacgttctatgcg
cgcggacaaactggtcagcaattattgttaggtgcatactcttcaatgatgagacaagtt
gatcttggaactgttgaattatatacgcgtcgtgaaatgttagatctggttgtgattgat
ggtaaagcgcgtggcgtgattatcagaaatttattaactggcgaaatcgaatcacacgaa
gctgatgcggttgttgtcgcttctggtggatactcaaacgtattctacttatcaacaaac
gcgatggcctgtgcagtaactgctgcctggaaagctcataaaaaaggagcgttctttgca
aatccttgttacacacaaattcacccgacttgtattccggtacatggtgaaaaccaatct
aaattaactcttatgtcagaatctcttcgtaatgacggacgcatttgggctccattgaaa
aaaggcgacgctcgcttaggaaaagatattccagaagcagaacgcgattatttcttagag
cgtatttacccaagcttcggaaatttagctccacgtgacgtagcttcacgccaagctaaa
taccgtgttgatgaaggtcacggcgctttaggtgaaaaagccgttttcttagatttcaaa
gacagtattaatcgtttaggtgaagacaaagtggctgagcgctacggaaatcttttccaa
atgtatgataaaatcacgggcgaaaatccatacaaacaaccgatgagaattttcccggct
ccgcattacacaatgggtggcctatgggttgattacaatcttcagtcaactgttccgggc
ttattcgtagctggtgaggcgaacttctctgatcacggtgccaatcgtttaggggcctcg
gcgttaatgcaaggtttagcagatggttatttcgtattgccatacacaatcggcaattac
ttcgcgaacacgaagttaggtaaagttgaaacaacaaacgatgcgttcaaacacgcagca
aacgaaacacaaactgagttgaacaaattcttaagtgttaaaggttcaagatcagttgaa
tctctgcacaaagaacttggccacatcatgtgggaaaaatgcggtatggctcgtgacaaa
gcaggccttacagaagcgatttctaaaatccaaaacttacgtaaagaatttcattcaaat
gttaatgttcctggcgaaggcaaaggaattaacaatgaattagaaaaagcaggccgcgta
gctgatttcatcgaacttggtgaattaatgtgtcgagatgctttaactcgtgaagaatct
tgcggtggtcactttagatctgaatatcaggttgatggtgaagcaaaacgtgatgatgaa
aaattctgtcacgcagctgcttgggaatggaacggttctgcagataaaacgcaaactcgt
caccaagaagaattaactttcgacaacgtccatttagcgactcgttcgtacaaatag
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