Bdellovibrio sp. qaytius: CIK05_00870
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Entry
CIK05_00870 CDS
T05880
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bdq
Bdellovibrio sp. qaytius
Pathway
bdq03030
DNA replication
bdq03430
Mismatch repair
bdq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bdq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CIK05_00870
03430 Mismatch repair
CIK05_00870
03440 Homologous recombination
CIK05_00870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bdq03032
]
CIK05_00870
03400 DNA repair and recombination proteins [BR:
bdq03400
]
CIK05_00870
Enzymes [BR:
bdq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CIK05_00870
DNA replication proteins [BR:
bdq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CIK05_00870
DNA repair and recombination proteins [BR:
bdq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CIK05_00870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
AAA_22
AAA_30
RuvB_N
TIP49
AAA_5
AAA_19
PIF1
AAA_16
AAA_14
AAA_18
AAA_assoc_2
TsaE
SRP54
Rad17
nSTAND3
DEAD
Zeta_toxin
APS_kinase
Viral_helicase1
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AZZ38250
LinkDB
All DBs
Position
complement(169737..171392)
Genome browser
AA seq
551 aa
AA seq
DB search
MSYQVFARKYRPQSFDQMVGQSHISQTLINALKSGRVPHAILFTGLRGTGKTTSARILAK
TLRCENPVNFSPCNVCPSCIEANSGRAVDIIEIDGASNNGVDAIRDLRDSVMFMPTSGKY
KIFIIDEVHMLSTAAFNALLKTLEEPPAHVIFMMATTEINKIPQTILSRCQRFDLRRIPF
KQMAGLLRKICDLEKIEADDKALWLIARQGDGSARDSLSLLDQVVNFTTGQLTEQNVAGV
LGLTDRGLIYDIYAHLLERNPKAIVADLEKAHTMGTSPSLFFEELIQLLRHTIVLKTAPD
SEILIDLPAEEVQSLREFAKTQSDSDLHMLFDMALKALSDLVRATDPFMVFEVCLLRIAQ
APRISDIQNLLSGATMPTSNQVAGPKFQGLLKTESTPVKPAVVISEPVKPQPAAPVVKPT
LNAEGWMKFVSHLKQESAFLAAKLDNIIFAGLNDKHFTLEAAAQFSFLAEQLTKGETHEK
LQGFIDSFFGEGYTFTVIKAKVASGDSAKSMNQKIEKISEDKITTEILQDPRVLAAQKVF
KAQVKIISTKE
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
ttgtcatatcaagtttttgcccgtaaatatcgaccacaatcgttcgaccaaatggttgga
caaagtcatatttcacaaacgctgatcaacgctttaaaatctggccgcgtaccccatgcc
attttattcactggtcttcgcggaacaggaaaaacaacatcagccagaattctagctaaa
actttacgttgcgaaaacccagttaatttttctccgtgcaatgtttgcccttcatgtatt
gaagccaactctggtcgcgctgtagatattattgaaatcgatggagcatcgaacaacggt
gttgatgcgattcgtgatttacgtgacagcgtgatgttcatgccaacttcaggcaaatac
aaaatttttattatcgatgaagttcatatgttatcgacggcggcttttaatgctttacta
aaaacattagaagaaccacctgcacatgtgatcttcatgatggcgacaactgagattaat
aaaattcctcaaacgatcttatctcgttgccaacgttttgatttacgccgtattccgttt
aaacaaatggctggtcttcttcgcaagatctgcgatttagaaaaaattgaagccgatgat
aaagcgttatggctcattgcccgtcaaggtgatggatcagctcgtgatagcttaagttta
ttagaccaagttgtaaatttcacgacaggtcaattgactgaacaaaatgtagctggcgtt
ttaggtttaacagatcgcggcttaatttatgatatctatgcgcacttacttgagcgtaac
ccaaaagctatcgtggcagatcttgaaaaagctcacacgatgggaacaagcccttcatta
ttttttgaagagttaattcaattattacgtcacacaatcgttttaaaaacagctcctgac
agcgaaatcttaattgatctacctgctgaagaagttcaaagcttacgtgaatttgcaaaa
actcaatctgattcagacctgcacatgctttttgatatggccttaaaagccttatcagat
ttagtacgtgcaactgatccgtttatggtttttgaagtttgtttacttcgcatagctcag
gcaccaagaatttctgatattcagaacttactttctggcgctacgatgccgacctcaaat
caggtggccggcccaaagtttcaaggactccttaaaacggagtccactccagttaaacct
gcggtggttatttctgaaccagtaaagcctcagccggccgcgccagtagtcaaaccaacc
ctgaatgccgaaggttggatgaaattcgtatctcatcttaaacaagaaagcgcgttctta
gcggcgaaattagataacattattttcgctggcttaaacgacaagcacttcacccttgaa
gctgcggctcagttttcgtttttagccgagcagctgacgaagggtgaaactcatgaaaaa
ttacaaggttttattgattcgttctttggagagggctacacttttactgttattaaagca
aaagtcgcttcaggggattctgccaaaagcatgaatcaaaaaattgaaaaaatatctgaa
gacaaaataacaactgagattttacaagacccgcgtgttctagcagcacaaaaagttttt
aaagctcaggtaaaaataatttctactaaggagtaa
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