Bdellovibrio sp. qaytius: CIK05_03240
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Entry
CIK05_03240 CDS
T05880
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
bdq
Bdellovibrio sp. qaytius
Pathway
bdq00470
D-Amino acid metabolism
bdq00550
Peptidoglycan biosynthesis
bdq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bdq00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CIK05_03240 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CIK05_03240 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bdq01011
]
CIK05_03240 (murD)
Enzymes [BR:
bdq01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
CIK05_03240 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
bdq01011
]
Precursor biosynthesis
Amino acid ligase
CIK05_03240 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
MurD_N
Pyr_redox
NAD_binding_7
2-Hacid_dh_C
Shikimate_DH
Pyr_redox_2
HcgC
DUF7591
Exonuc_V_gamma
TrkA_N
KARI_N
ThiF
FMO-like
Pyr_redox_3
AlaDh_PNT_C
Tape_meas_lam_C
DUF1542
Motif
Other DBs
NCBI-ProteinID:
AZZ35853
UniProt:
A0A3T0RP41
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All DBs
Position
634378..635769
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AA seq
463 aa
AA seq
DB search
MWTELSELKDKKILVVGLGKTGVSLAKFLTKYEAQVTITDHKSKPELSAQLDQLEGYTNI
KFELGSHSPKTFLSQDLVILSPGVASHLKIFEYARQQGVKITGEFEFSAGFIKEPIAAVT
GTNGKTTIARLCESMLKESGIDVWVGGSNENPITNYLLEEKKAKLVIAEVSGFMLEHCVN
FNPANVVFCNLAENHLDRYRSMEEYVNAKRKVFKNTNQATTSILNADDNAVVELARDPSV
QRGRIFYFSRKPALEPQIMNIGGAVNIGDEIKVRTGPDIESFSVKNIKMKGKHSVENVMA
ALLLAREYGANHDAIQRAIDNFNGLKHRLEYVRKVGGVLFYNDSKATNVHAVLRSLDCFD
ENVILIAGGKDTNLNYEPLRNLIKRKVKCLILVGEAKERINRDLGDFTETYLIGTFEEAV
LIAYQKSRIADIVLLSPACSSFDMFDSYEERGDYFKEIVKKFK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtggacagaattatcagaactaaaagataaaaagattttagtagtcggccttggtaaa
acaggggtttctttagctaaatttttaacaaaatatgaagctcaagtgactattacagat
cataaatcaaaacctgagttatcagcgcaattagatcagcttgaaggttacacgaacatc
aagtttgaattaggttctcattcacctaaaacattcttatcgcaagatttagttattctg
tctccgggtgtagcttctcacttaaaaatctttgaatacgcgcgccaacaaggtgtgaaa
atcacaggtgagttcgaattctcggcaggctttatcaaagaaccaattgctgcagtgact
ggaacaaacggtaaaactacaatcgctcgtttatgtgaatcaatgcttaaagaaagcggc
atcgacgtatgggttggtggttcaaacgaaaatccaattacaaattatttattagaagag
aaaaaagctaaactagttattgctgaagtttctggttttatgcttgagcattgcgtaaat
tttaatccagctaacgtggttttctgtaatttagctgaaaatcacttagaccgttaccgt
tctatggaagagtacgtaaacgctaaacgtaaagtgtttaaaaacacaaaccaagcgaca
acatcgatcttaaatgccgatgataacgcggtggttgaattagctcgtgatccttcggtt
caacgtggacgtattttctacttctctagaaaaccagccttagaaccacaaatcatgaac
atcggtggagctgttaatatcggtgacgaaattaaagttcgcacaggcccagacattgaa
tctttcagcgtaaaaaacatcaaaatgaagggtaaacactctgttgaaaacgtaatggca
gctttactattagctcgtgaatacggcgctaatcacgacgctattcaacgtgcgattgat
aattttaacggccttaaacaccgtttagagtatgtgcgtaaagtgggcggggttttattc
tacaatgactctaaagctactaacgttcatgcggttttacgctcgttagattgttttgat
gaaaacgtaattttgattgctggtggtaaagatacaaatcttaattacgagcctttacgt
aatttaattaaacgtaaagtaaaatgcttaattctagtgggtgaggctaaagagcgcatc
aaccgtgatttaggtgatttcactgaaacttacctgatcgggacatttgaagaggcggtt
ttgatcgcttaccaaaaatctcgtattgccgatatcgttcttctttctccggcctgctca
agctttgatatgtttgacagttacgaagagagaggcgactattttaaagagatcgtcaaa
aaattcaaatag
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