Bdellovibrio sp. qaytius: CIK05_04470
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Entry
CIK05_04470 CDS
T05880
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bdq
Bdellovibrio sp. qaytius
Pathway
bdq03030
DNA replication
bdq03430
Mismatch repair
bdq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bdq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CIK05_04470
03430 Mismatch repair
CIK05_04470
03440 Homologous recombination
CIK05_04470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bdq03032
]
CIK05_04470
03400 DNA repair and recombination proteins [BR:
bdq03400
]
CIK05_04470
Enzymes [BR:
bdq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CIK05_04470
DNA replication proteins [BR:
bdq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CIK05_04470
DNA repair and recombination proteins [BR:
bdq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CIK05_04470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
FAN1_HTH
VRR_NUC
TPR_19
DUF4864
Motif
Other DBs
NCBI-ProteinID:
AZZ36075
UniProt:
A0A3T0RPU3
LinkDB
All DBs
Position
929030..931222
Genome browser
AA seq
730 aa
AA seq
DB search
MALPVLPAKYYLTHFHEFLEFIEQHYLPVLEPTQVDFITKFKSLSENAQCVYVRMVNRKG
VLFAQGEFVKYNEIADQTSAFAELRSHHFVTHVTNKHKLDLIEFYSKKETHLWLKKCNIA
FNKSDTSEKLREIGLANIAVLDISQLQDLDQLMVQGYQDELSYLLFLFFGTLQTSLSLYT
LRDLGVRQKSQFKEKFKPRYQDLTIAKAEYKLLKLLNELDDSNLDQALEFCQSLYINKNS
THQLKSELLLELANRFESAQPQKAILALKDAKNHPARQNLAKLYYKLDQKEDCKSVLESI
IDQPLNDEEILFAEDYLERKFNKKKMGYLTQALRSAEEISLSEAYLKSPEAGVKDYYAKK
GITATFTENYLWCGLFGLFFWSEIFENEQTALHNQFERSPADLVGEDFYLNHKEQIENKI
LLLKDGKKAEMAILKTVAENHGKLNDIFQWHPTLAHLVLNFLKATKDKDVAYILRMMCQN
FARYHSGYPDLMIEAENGIQFVEVKAEGDALRAKQLSKLRLLKEAGFEVGVLRVNWVTDP
NQVYVVVDIETTGGSAAFHKITEIGAVKMQNGKVIDEFQTLINPGRAIPKYITAITHITN
EMVADAPKFSDIADNFFEFTQGAIFVAHNVRFDYGFIQKEFARLETSFVRPQMCTVQGMR
KHYPGLHSYSLKNLCVNFNISLEQHHRAMFDAKAAAELLKLIHLKKSPEITQAAPEGIVQ
DSVVDRHFFE
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggctttaccggttttacctgcaaaatattatttaacgcattttcatgaatttcttgaa
ttcatcgagcagcattacttgccagtgctagagccaactcaagtcgattttattacaaaa
tttaaaagtcttagtgagaatgcacaatgcgtttatgtacgcatggtgaatcgtaagggc
gttttattcgcgcaaggtgaatttgttaaatataacgagattgcagatcaaacttctgct
tttgctgagcttagaagtcatcattttgtcactcacgtcacgaataaacataaattagat
ttaattgaattttatagtaaaaaagaaactcatctttggttaaaaaagtgcaatatcgcg
ttcaataagtctgatacttcagaaaagcttcgtgaaatcgggctggccaatattgcagtg
ttagatatttcgcagttacaagatttagatcaattgatggtgcaaggttatcaagatgaa
ttaagttatcttttatttttattttttggaactttgcaaaccagcttaagtctttacacg
ttacgtgatctgggtgttcgacaaaaaagtcagtttaaagaaaagtttaaaccacgttat
caagatttaacaattgctaaagctgaatataaattacttaaactattaaatgaacttgat
gacagcaatcttgatcaagctttagagttttgtcagtcgttgtatattaataaaaacagc
actcatcagcttaagagtgaattgttgttagagcttgcaaatcgttttgaatcagctcag
ccccaaaaagctattctcgccttaaaagatgctaaaaatcatccagctcgtcaaaacttg
gctaagctttattataagctagatcaaaaagaggattgtaaatcagtgctcgaatcaatt
attgatcagccattgaatgacgaagaaattttatttgcagaagattacttagagcgtaaa
tttaataagaaaaaaatgggttacttaactcaagccttgcgctcggctgaagaaatctca
ctcagcgaagcgtatttaaaaagccccgaggccggggtcaaagattattatgctaaaaag
ggcataacagccactttcaccgaaaattatttatggtgtgggctatttggtttatttttc
tggagcgaaattttcgaaaatgaacagacagcgcttcacaatcaatttgaacgatcaccg
gcagatctagtcggtgaagatttttatttaaaccataaagaacaaatcgaaaataaaatt
ttacttttaaaagacggtaaaaaagccgaaatggcgattttaaaaacggtggctgaaaat
catggaaagctgaatgatatttttcaatggcatccaacgctggctcatttagttttaaat
tttttgaaagctacaaaagataaagacgtggcttatattttacgaatgatgtgtcaaaat
tttgcaagatatcatagtgggtatcctgatctgatgatcgaagcagaaaacggcattcaa
tttgtcgaagttaaagccgaaggcgatgcgcttagggccaaacaactttcaaaattacgt
cttttaaaagaagccggttttgaagtgggtgttttgcgtgtgaattgggtcacagatccg
aatcaagtttatgtggttgtcgatatcgaaaccacaggtggatcggcggcttttcataag
atcactgaaattggtgccgtgaaaatgcaaaatggtaaagtcattgatgaatttcaaaca
ttgattaatccgggccgcgcgattcctaagtacatcacggcgattactcatattactaat
gagatggtggctgatgcgccaaagttcagcgatattgccgataatttttttgaatttact
caaggggctatttttgtagctcacaatgtgcgttttgattatggttttattcaaaaagaa
tttgcacgtcttgaaacttcatttgttcgaccacagatgtgcactgtgcaaggtatgcga
aaacactatccaggattacattcgtacagtttaaaaaatctgtgtgttaattttaatatc
tcattagagcagcaccaccgcgctatgtttgatgcaaaagccgctgctgaattacttaaa
ttaattcatctaaaaaagtctccagaaatcacccaagctgcacctgaggggattgttcaa
gactcagtggtcgatcgccattttttcgaatag
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