Entry |
|
Symbol |
holA
|
Name |
(GenBank) DNA polymerase III subunit delta
|
KO |
|
Organism |
bdq Bdellovibrio sp. qaytius
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:bdq00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CIK05_06265 (holA)
03430 Mismatch repair
CIK05_06265 (holA)
03440 Homologous recombination
CIK05_06265 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:bdq03032]
CIK05_06265 (holA)
03400 DNA repair and recombination proteins [BR:bdq03400]
CIK05_06265 (holA)
Enzymes [BR:bdq01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CIK05_06265 (holA)
DNA replication proteins [BR:bdq03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CIK05_06265 (holA)
DNA repair and recombination proteins [BR:bdq03400]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CIK05_06265 (holA)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
1300746..1301747
|
AA seq |
333 aa
MAIIDQNKFYKDLEAGNVTPVYFIFGDEPFLIDQCVNRFKYGLLDENSLDFNYSLFYAGD
ADIQSVKDTVETLPVFAQRRVVILKNSNELKDSEWNELESLFKNPVDSTVFVLFADKIDK
RKKHFKNIIDVASSLEFKKPYDNEIPRWINYYAGQFELKLTQPAVHRLHRLVGNNLSEIY
AQLEKIKVYLDGSSNVDAEHVNAVVSNSREENVFDFTKAVGQKDRVRALEQIVNLLDQGQ
SEIGIVNLLARHMRILLTVRTGLDQGIGGAKLANLANVSPYFVDEYAAQAKGWPVRKLED
SLVLLGETDKALKSSPLSSHIWLENLVLKSCSM |
NT seq |
1002 nt +upstreamnt +downstreamnt
atggcaatcattgatcaaaataaattctataaagatttagaagcaggaaatgtaactcct
gtttattttatttttggtgatgaaccatttctaatcgatcaatgtgtgaatcgttttaag
tacggtttattagacgaaaactctttagattttaattactcgttattttatgccggcgat
gctgatattcagtcggtgaaagacacggttgaaacattacctgtgtttgcgcaacgtcgc
gtggtgattttaaaaaattcgaatgaattaaaagattctgaatggaacgaattagaatcg
ctatttaaaaacccagttgattcgacagtgtttgttttgtttgccgataaaatcgataaa
cgtaaaaaacatttcaaaaacattattgatgtcgcttcatcgttagaatttaaaaaacct
tacgacaatgaaattccacgttggatcaattactatgctgggcagtttgaattaaaactg
actcaacccgcagttcacagattgcatcgattagtgggtaataacttatctgaaatttat
gcgcagctagaaaaaatcaaagtttacttagacggtagttcgaatgtagatgctgaacac
gttaacgccgtagtttcaaatagccgcgaagaaaacgttttcgatttcaccaaagctgta
gggcagaaagatcgcgttcgcgctttagagcaaatcgtaaatcttttagatcagggccaa
agcgaaatcggtatcgtgaatttactggctcgtcatatgagaattttattaactgtgcgc
acgggtttagatcagggtattggcggagctaaattagctaacttggcgaatgtatcgcct
tatttcgttgatgagtatgcagctcaagctaagggctggcctgttcgtaagcttgaggat
tctttggttcttttaggtgagactgataaggcgttgaaatcgtctccgttgtcgagtcat
atctggcttgagaacttggttcttaaatcttgttctatgtaa |