Bdellovibrio sp. qaytius: CIK05_06475
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Entry
CIK05_06475 CDS
T05880
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bdq
Bdellovibrio sp. qaytius
Pathway
bdq03420
Nucleotide excision repair
bdq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bdq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CIK05_06475
03430 Mismatch repair
CIK05_06475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdq03400
]
CIK05_06475
Enzymes [BR:
bdq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CIK05_06475
DNA repair and recombination proteins [BR:
bdq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CIK05_06475
MMR (mismatch excision repair)
Other MMR factors
CIK05_06475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AZZ36446
UniProt:
A0A3T0RQT9
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All DBs
Position
1342615..1344630
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AA seq
671 aa
AA seq
DB search
MSKWTQGLNPEQGDAVNHNYGPLLILAGAGSGKTTVLVSRTGRLIDDKIATAEKICVLTF
TNKAARELKHRVQLKVGIKSKGLWAGTFHSFGLQLLRKNHKLCGLPAQFGILDQSDSQAV
LKDLAKNLRNTTKDKFDFSKVLECVNLLRAKKSLPVDQLEEYHEMAIALTPGYEKELLRL
GVVDFEGLLLEPLRLFREHPEVLMQTQERFQQIMVDEFQDTNQEQMKLIRAISESHMNLS
VVGDDDQSIYGWRGAEIQNILNFPKDFKNCQVIKLERNYRSSSSILDLGNAVIAKNAKRH
GKILRSEKAKKAEHIKPEVFVLDNEDEESDFVFREIQTIKAAGGKNKDIAILYRSNTQGA
FIETTLRKGQIPYSITGGTSIFDRKEAKDWLAFLKQSLNDDEVSFRRIVNLPPRGLGENT
LDKLITYAEEVGLNLPQASKKWDKAGLPEEKGKILDNFNEWLWTFPQRLLDDTSIGETIS
KRFEFLVREIGYRDLLIKNSEGQAFEKRWQVIEIVGRILESFVGRRDPSIGTLKDFVDSM
QLRDDVGNEEAKDEVQLMTFHASKGLEFPNVLLVGVEEDLLPHKRLGSDIDEERRLFYVG
ITRAQEKLTLSYCRQRKKQGVVRPVSPSRFLIEVEEQDLVIRHELGNRPVTANEREDLVK
NFLAKFSSERK
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaaatggacccaaggacttaatcctgagcaaggcgatgccgtaaatcataattac
ggcccgttacttattttagccggtgccggttcaggtaagaccacggttttagtttctcgc
acggggcgtttgatcgatgataaaatcgcaaccgcagaaaaaatttgtgttttgaccttt
accaacaaagccgcgcgtgaactaaaacaccgcgtacaacttaaagttggtattaaatca
aaaggtctctgggccggaacatttcattcgtttggcttacagcttttacgtaagaatcac
aaattatgtggcttaccagcgcagtttggaattttagatcaatctgattcgcaagctgtt
ttaaaagacttagctaaaaatttacgaaatactacaaaagataaattcgatttttcaaaa
gttttagaatgcgtaaatcttttacgcgctaaaaaaagtttaccagtagatcagctcgaa
gaataccacgagatggctattgctttaactccgggttatgaaaaagaacttttacgttta
ggcgtggtcgattttgaagggctgttgcttgagccattacgtttatttcgagaacaccct
gaagtcttaatgcaaacgcaagagcgctttcagcaaatcatggtggatgaatttcaagac
accaatcaagaacaaatgaaattgattcgcgcgatttctgaatcacacatgaacctttca
gtggtgggtgatgatgatcagtcgatttatggctggcgcggggccgagattcaaaatatt
ttaaattttccgaaagattttaaaaattgccaggtgattaagttagaacgtaattaccgt
tcaagttcgtcgattttagatttaggcaatgccgttattgctaaaaatgcaaaacgccat
ggtaaaattctacgttctgaaaaagctaaaaaagctgaacatattaaacccgaggttttc
gttttagataacgaagacgaagaatcagactttgtatttcgtgaaattcaaacgataaaa
gcggctggtggtaaaaacaaggatatcgcgattctttaccgctcaaatacacaaggtgcg
tttattgagacgactttacgtaaaggtcagattccttatagcattaccggtggcacatcg
atctttgatcgtaaagaagccaaagactggttagcgtttttaaaacaatctttaaatgat
gatgaagtttcttttcgccgcattgtaaatcttccgccacgtggtttaggtgaaaacacc
ttagacaaacttataacttacgctgaagaagttggattaaatcttccgcaagcttctaag
aaatgggataaagcaggtcttcctgaagaaaaaggtaagatcttagataactttaatgaa
tggctatggacttttccgcagcgtttattagatgacacttcgattggtgaaacgatctcg
aagcgttttgaatttctagtgcgcgaaatcggttaccgtgatcttttaattaaaaattct
gaaggccaggcttttgaaaaaagatggcaagttatcgaaatcgttggccgcattttagaa
agctttgtgggtcgtcgtgatccgtcaattggtacgttaaaagatttcgttgatagtatg
cagctgcgcgatgatgttggtaatgaagaagcaaaagatgaagtgcagttaatgacattt
catgcttctaaaggtttagaatttccgaatgtccttttagttggtgttgaagaagatttg
cttccgcataaacgtttaggttctgatatcgatgaagagcgtagacttttttatgtgggt
attacgcgcgcgcaagaaaaactcacgttaagttattgtcgtcagcgtaaaaaacaaggt
gtggttcgtccggtttctccgtcgcgttttttaattgaagtcgaagagcaggaccttgtg
attcgtcatgagctaggtaatcgtccagttacagccaatgaacgtgaagatctagttaaa
aactttttagctaaattcagttctgagcgaaaataa
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