Bdellovibrio sp. qaytius: CIK05_08340
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Entry
CIK05_08340 CDS
T05880
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bdq
Bdellovibrio sp. qaytius
Pathway
bdq00260
Glycine, serine and threonine metabolism
bdq00630
Glyoxylate and dicarboxylate metabolism
bdq00670
One carbon pool by folate
bdq00680
Methane metabolism
bdq01100
Metabolic pathways
bdq01110
Biosynthesis of secondary metabolites
bdq01120
Microbial metabolism in diverse environments
bdq01200
Carbon metabolism
bdq01230
Biosynthesis of amino acids
bdq01240
Biosynthesis of cofactors
bdq04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
bdq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CIK05_08340 (glyA)
09102 Energy metabolism
00680 Methane metabolism
CIK05_08340 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CIK05_08340 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CIK05_08340 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CIK05_08340 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CIK05_08340 (glyA)
Enzymes [BR:
bdq01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CIK05_08340 (glyA)
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Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
DegT_DnrJ_EryC1
WD40_Prp19
Motif
Other DBs
NCBI-ProteinID:
AZZ36798
UniProt:
A0A3T0RRQ4
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All DBs
Position
complement(1740342..1741598)
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AA seq
418 aa
AA seq
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MSTNVFPNFNDSEVFNLIEQESERQKFGLEMIASENYTSPQVMKAQGSILTNKYAEGYPG
KRYYGGCQFVDGVETIAIERAKKLFGSKFANVQPHAGSQANMAVYLAACKAGDTILGMDL
SHGGHLTHGSPVNFSGMLFKAASYKLDPTTGLINYDTIRATAREVKPKMIIAGYSAYSRH
LDFAKFREIATEVGADLLVDMAHFAGLVASGHHQSPVEFADFVTSTTHKTLRGPRGGLIL
TNSEEKAKTLNSRIFPGIQGGPLEHVIAAKAVAFGEALQPEFKTYIDHVIKNARVLAEEM
KSQGFNLVTGGTDNHLILVDLKQSQVADTVTGKVAEGILDLAGITVNKNTVPNETRSPFV
TSGIRIGTPALTTRGMKESEMKTIAGWISQVLKNPENTDLHQRIHNQVKELCKSFPIY
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaaacgtttttcctaattttaacgattcagaagtttttaacttaatcgagcaa
gaatcagagcgccaaaaatttggtttagagatgattgcttcagaaaattatacatctccg
caagttatgaaagctcaaggatcaattctgactaacaagtacgctgaaggttatccagga
aaacgttattacggcggttgccagttcgttgatggcgttgaaaccatcgccattgagcgc
gctaaaaaacttttcggatcaaaatttgccaacgttcaaccccatgctggatcacaagct
aatatggctgtgtacttagcagcctgtaaagcgggcgacacaatcttaggaatggattta
tctcacggtgggcatttaactcacggatcaccagttaatttttcgggtatgttatttaag
gcagctagttacaaacttgatccaacaactggactaattaattacgacaccattcgcgca
acagctcgtgaagtaaaaccaaaaatgattatcgcaggctactcagcgtattctcgtcat
ttagattttgctaaatttcgcgagatcgcgactgaagttggcgctgatttattagttgat
atggctcacttcgcaggattggttgccagcggtcatcatcaatcccctgttgagtttgca
gactttgtaacttcaacaacgcataaaacattacgcggccctcgtgggggtttgattctt
acaaactctgaagaaaaagctaaaacattaaattcaagaatttttccaggcattcaaggt
ggtccattagaacacgtgattgccgctaaagctgtcgcgttcggcgaagcacttcaacct
gaatttaaaacctacattgatcacgtgatcaaaaatgcaagagttctagctgaagaaatg
aaatctcaaggtttcaatcttgtcaccggcggaactgacaatcacttaatcttagttgat
ttaaaacaatcacaagtcgctgatacggtgactggcaaagtagctgaaggtattttagat
ttagccggcatcactgtgaataaaaacactgttcccaacgaaacacgttctccgtttgta
acaagtgggatccgcatcggaacacctgcactaacaacgcgtggaatgaaagaatcagag
atgaaaacaatcgctggttggatttctcaagttttaaaaaatccagaaaacacagattta
catcaaagaatacacaaccaagtgaaagaactatgcaaaagttttccaatttattaa
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