Bdellovibrio sp. qaytius: CIK05_08660
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Entry
CIK05_08660 CDS
T05880
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bdq
Bdellovibrio sp. qaytius
Pathway
bdq03030
DNA replication
bdq03430
Mismatch repair
bdq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bdq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CIK05_08660
03430 Mismatch repair
CIK05_08660
03440 Homologous recombination
CIK05_08660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bdq03032
]
CIK05_08660
03400 DNA repair and recombination proteins [BR:
bdq03400
]
CIK05_08660
Enzymes [BR:
bdq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CIK05_08660
DNA replication proteins [BR:
bdq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CIK05_08660
DNA repair and recombination proteins [BR:
bdq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CIK05_08660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
T2SSK
NdhO
DUF4911
Motif
Other DBs
NCBI-ProteinID:
AZZ36858
UniProt:
A0A3T0RRW1
LinkDB
All DBs
Position
complement(1804756..1808304)
Genome browser
AA seq
1182 aa
AA seq
DB search
MSFSHLHVHSEYSLLEASCRVKAIAKKAAEYQQPAVALTDYGNMFGAIEFYFACQEKNVK
PLIGLEAYIAPNSRLDKKQDPNQKYSEIALGPQRLVFLAQNLEGYQNLCKLSTVGYQEGF
YWKPRIDYDVLKENSSNLICLSGTQRGEVIGTLLKEGPEAALNKVRKLKEIFDDRFYLEL
SRTLPQGSDLQKQINSFILEASKICSVPIVASNDVHYITQDDQIAQEVLVCIGSNKTLAD
ESRYKLGSSDFYFKSTESMTKLFSDLPEAISNTQVISDRCNVKFKLKDEAGKAIYHLPSF
PTSEGRTVKEEILHHATEGLKVRFEELKAVDQEVPEEKQPEYFARLNFELSIIDRMGFNG
YFLIVMDFINWAKNRDIPVGPGRGSGAGSLVAYSLRITDLDPIPNFLLFERFLNPERVSM
PDFDIDFCQDRRQEVIQYVTEKYGAASVSQIITYGKLQTRAALKDVGRVLGMTFAEVDVV
SKLIPDKLGINLTDSLAAEPRIREAMEMNPTVQTLVELALRVEGLVRHAGIHAAGVIIAD
GSLVKHAPMYRGADDENVVQYDMKHAEKIGLIKFDFLGLKTLTHIHHALKLVKQNRGLDV
LEKNIPINDSKIYELLSRGDTAGVFQFEGEGITDATRRIKPTSFADITAITSLYRPGPMA
NIPEFTKRKHGEAPVEYLLPETKQVLEETYGIMVYQEQVMGIASIIAGYSLGEADMLRRA
MGKKIKEEMEQHRQRFLKGAAERGHDKQKSDELFELMYKFADYGFNKSHAAAYSVITAQT
AWVKHYYPAEFFAALLSTEVGDTDKVVKYVKDAQKRGLEVKAPHVNFSDYLFSVKGEIIY
FGLGGIKGVGSAAVEAIIEARDRQPNKLFASLDDFFENVDLRRVNKKVIECMIKAGAFDG
FGLHRAQLFAGYSKYLDYAVGAQKDKDVGQVSLFDMGGEKQSIVLEDLRQWSRTQSLSYE
KEVLGFYLSDHPLRGFEKLAKVWTTCEIVDLHKHDMSPEEKAAEAAKKESGKWNRFQKDA
KKRVIVAGLIIENREMITKKGTRMAFAKLEDLTGTAELVIFPDTFEKCGSYLKDERPLLI
GGGLEINEGAAKIIVDNIAPFDDIMKKTKRVSFRLDKLETSDFEKLDTIFDAFQGETNVR
LVLSLNEKIVEMQPEAPKRIQISDAFFEEVHQVFGRTDFIEI
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgtcattttcgcacttacatgttcattctgagtactcgcttttagaggcttcgtgccgc
gtaaaagctattgctaaaaaagccgctgaataccaacaacctgcagtggccttaactgat
tatggaaacatgttcggtgcgattgagttttattttgcctgccaagaaaaaaacgtaaag
ccattgattggtcttgaagcgtacatcgcgcccaattcacgtttagataaaaaacaagat
cccaatcaaaaatattctgagatcgcactcggtccgcagcgtttagttttcttagcgcaa
aacttagaagggtatcaaaatctttgtaaactttcgacagtgggttaccaagagggtttt
tattggaagcctcgtatcgattacgatgttttaaaagaaaacagctctaatctaatttgt
ctaagtggcacacagcgtggtgaagtgattggcactcttttaaaagaaggtccagaagcc
gccttaaataaagttcgtaaattaaaagaaatttttgatgaccgcttttatttagagtta
tcgcgaacacttccgcaaggcagtgatctgcaaaaacaaattaatagttttattttagaa
gcctctaaaatttgtagtgttccaattgtggcttcgaatgatgtgcattacatcacgcaa
gacgatcaaattgcgcaagaagttttagtttgtatcggttcaaataaaactttagccgat
gagtctcgttataaattaggaagctctgatttttattttaaatcgactgaaagcatgacg
aaacttttttctgatttgcctgaagctatttctaatacgcaggtaatttcagatcgttgt
aacgttaaatttaaacttaaagatgaggccggaaaagcgatttaccatttaccaagcttt
ccgacatctgaaggtcgtacagttaaagaagagattcttcatcatgccactgaaggtttg
aaagttcgttttgaagaacttaaagctgttgaccaagaagttcctgaagaaaaacaacct
gagtattttgctcgtttgaattttgaattatcaattatcgatcgcatgggttttaacggt
tactttttgatcgttatggatttcattaactgggcgaaaaatcgcgacattcccgtaggc
ccaggccgtggatcgggagccggttcattagtcgcttacagtttacgtattaccgatctt
gatccgattccaaattttctactgtttgagcgtttcttaaatccagaacgtgtatcgatg
cccgatttcgatatcgatttctgtcaggatcgcaggcaagaagttattcaatatgtaact
gaaaaatacggagccgcttcggtttcgcaaattatcacttacggaaaactacaaacacgc
gcagctcttaaagatgtgggccgcgtattaggtatgacttttgccgaagtggatgtggtt
tcaaaattaattcctgataaattaggaattaatttaacagattcattagcagccgaaccg
cgtattcgcgaagcgatggaaatgaatcctacagttcaaacacttgttgaactggcatta
agagttgaaggtttagttcgtcacgcgggtattcatgccgcaggcgttatcattgccgat
ggcagcttagttaagcatgcaccgatgtatagaggtgctgatgacgaaaacgttgttcag
tacgatatgaagcatgccgagaaaatcggattaattaaattcgacttcttaggtcttaaa
actttaactcatattcatcatgctttaaaattagttaaacaaaatcgcggattagatgtt
ttagaaaaaaatattccaatcaatgattctaaaatttatgaattattatctcgtggtgat
acggctggggtgtttcagttcgagggtgaaggtattaccgatgccactcgtcgaattaaa
ccgacaagctttgctgatatcacagcgatcacttcgttatatcgtccgggtccgatggcg
aatattcccgagtttacgaagcgtaaacatggtgaagcgcctgttgaatatttattacca
gaaaccaaacaagtcttggaagaaacctacggaatcatggtttaccaagagcaagttatg
ggtattgcttctattatcgccggatactcactcggtgaagccgatatgcttcgtcgtgcg
atgggtaaaaagattaaagaagaaatggaacagcaccgtcagcgtttcttaaaaggggcg
gctgagcgcggacacgataagcagaagtctgacgagctttttgaattaatgtataagttt
gccgattacggttttaataaatcgcatgccgcagcttactcggtcattacagcgcaaaca
gcgtgggttaaacattattacccagcagaatttttcgcagcgttattatcaactgaggta
ggggacacggataaagttgttaagtacgttaaagatgcgcaaaaacgtgggctagaagtt
aaagctccgcacgtgaatttttctgattatttattctcggtaaaaggcgaaattatttat
ttcggtcttggcggtattaaaggtgtggggtcagcagctgttgaagccatcatcgaagcg
cgtgatcgtcagccaaataaattatttgcaagccttgatgatttctttgaaaatgtagat
ttgcgtcgtgtaaataaaaaagtaatcgaatgtatgattaaagccggggcctttgatggt
ttcggtctgcatcgtgcgcagttatttgccggctattctaaatatttagattacgctgtg
ggcgcgcaaaaagataaagatgtgggacaagtaagtctttttgatatgggtggtgaaaaa
caatctattgtcttagaagatttaagacagtggtcgcgcacacaatctttatcttatgaa
aaagaagttttaggtttttatttaagtgatcatcccttacgtggttttgaaaaattagct
aaggtttggacaacgtgtgaaatcgttgatctgcataaacatgatatgtcgcctgaagaa
aaagccgccgaagctgctaaaaaagaaagtggcaaatggaaccgctttcaaaaagatgca
aaaaagcgtgtgatcgttgcgggtcttattattgaaaatcgcgagatgatcactaaaaaa
ggcacacgtatggcctttgcaaaattagaagatttaaccggcacggccgaactagtgatt
tttccagatacatttgaaaaatgcggcagttatttaaaagatgaaagaccacttttaatt
ggtggtggtttagaaattaacgaaggggctgcaaaaattatcgtcgataacattgcgccg
tttgatgatattatgaaaaaaactaagcgcgtgtcgtttagactagataagcttgaaaca
agcgattttgaaaaattagatacaatctttgatgcttttcagggtgaaacgaatgtacgc
ctggtcttaagtctgaatgagaagatcgtcgagatgcagcccgaagcgcctaaacgcatt
cagatatcggatgcattttttgaagaagttcatcaggtttttggtcgtacagactttatc
gagatctaa
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