Bdellovibrio sp. qaytius: CIK05_09250
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Entry
CIK05_09250 CDS
T05880
Name
(GenBank) fatty oxidation complex subunit alpha
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
bdq
Bdellovibrio sp. qaytius
Pathway
bdq00071
Fatty acid degradation
bdq00280
Valine, leucine and isoleucine degradation
bdq00310
Lysine degradation
bdq00362
Benzoate degradation
bdq00380
Tryptophan metabolism
bdq00410
beta-Alanine metabolism
bdq00640
Propanoate metabolism
bdq00650
Butanoate metabolism
bdq00907
Pinene, camphor and geraniol degradation
bdq00930
Caprolactam degradation
bdq01100
Metabolic pathways
bdq01110
Biosynthesis of secondary metabolites
bdq01120
Microbial metabolism in diverse environments
bdq01200
Carbon metabolism
bdq01212
Fatty acid metabolism
Module
bdq_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
bdq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
CIK05_09250
00650 Butanoate metabolism
CIK05_09250
09103 Lipid metabolism
00071 Fatty acid degradation
CIK05_09250
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
CIK05_09250
00310 Lysine degradation
CIK05_09250
00380 Tryptophan metabolism
CIK05_09250
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
CIK05_09250
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
CIK05_09250
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CIK05_09250
00930 Caprolactam degradation
CIK05_09250
Enzymes [BR:
bdq01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
CIK05_09250
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
CIK05_09250
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
CIK05_09250
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
F420_oxidored
NAD_Gly3P_dh_N
AlaDh_PNT_C
RS_preATP-grasp-like
Motif
Other DBs
NCBI-ProteinID:
AZZ36970
LinkDB
All DBs
Position
complement(1909706..1911886)
Genome browser
AA seq
726 aa
AA seq
DB search
MELEKTTQSNTSGNAFSVAEKNGIATVTFDLPGERVNKFSTPVMNEFKALLAKLKTSNYK
FVVFRSAKSKIFIAGADIEEIKALSTEAGVRAAVGEGQAIMNMVEDLPMPTMALINGACA
GGGCEFILACDYRIASDDSSTRIGLPETQLGILPGFGGCVRLPRVVGIQAALDVILAGKL
LNAKKALKIGLVDYMVHPNLLESFAEKEIQKILSSGKGKRRKTFQPRGFVAGLLEGPLKG
VVFSQAKKATLKATKGQYPAPLEALEVIKKSYKMSDRAKALEIEKDHFVRCALTDISKNL
IHVFYLTEMVKKSSGVADKNVKPRTVKNIGVLGAGTMGGGIAYVAADKGIGVRVKDISNE
ANAKALKHAYDLWKKLVKKKVIDNYQFSQKSSLVSTTVDYSGFKTLDVVVEAIVENMDIK
KKVIAETAKNMRDDAIIVTNTSSLSVTEMSEGHPRPEYFAGMHFFSPVHKMPLVEVIRGP
KTSDETISTVFELSKKMGKMPVVVKDGPGFLVNRLLLPYMAEAAFLLTEGMDIETVDKAY
VKFGMPMGPFELMDSVGLDVCAKVLKIFRKAYPDRVEVSPIMEKLEANKTRLGQKTNLGF
YKYDHSGRKTEVDQTVYAELNLGARTKPYDAQECVERGVFAMINECCLALDADRIVETPH
EVDLAMIMGTGFPPFRGGLLKYADSIGAKYVAERLTHYAAARNAKARLSPSVKLAERASS
GKKFYN
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggaattagaaaaaaccacacaatctaatacatctggaaacgcattttcagtcgcagaa
aaaaatggaattgccacagtcacttttgatttaccaggtgaaagagttaataaattttca
acgcctgtgatgaatgaattcaaagccttattagcgaaattaaaaacttcaaattacaaa
ttcgttgtttttagatctgcaaaatcaaaaatctttattgcaggcgcggatatcgaagaa
atcaaagcgttaagcactgaagcgggcgttcgcgctgctgttggtgagggtcaagccatc
atgaacatggttgaagatctgccaatgccaacaatggctttaatcaacggcgcttgcgct
ggtggtggctgtgaatttattttagcctgtgattaccgtatcgcttctgatgattcatca
acacgtattggtcttcctgaaacacaacttggtattttaccaggttttggcggttgcgtt
cgtttaccacgagttgttggtattcaagcggcattagatgtgattttagctggtaaatta
ttaaatgctaaaaaagctttaaaaattggcctagtcgattacatggttcacccgaattta
ttagaatcatttgctgaaaaagaaatccaaaagattttaagctctggcaaaggtaaacgc
cgtaaaacttttcaacctcgcggtttcgtagctggtttattagaggggccattaaaaggc
gttgtgttttcacaagcaaaaaaagccactttaaaagcgacaaagggtcaatacccagct
ccgttagaggctttagaagttattaaaaaatcttacaaaatgtctgatcgtgcaaaagct
ttagaaatcgaaaaagatcactttgttcgttgtgctttaactgatatttctaaaaactta
attcatgtattttacttaactgaaatggttaaaaagtcatcgggtgttgctgataaaaac
gtaaaaccaagaactgttaaaaatattggtgttttaggcgcgggaactatgggtggcggt
attgcctacgtagctgcagataaaggtattggcgtacgcgtaaaagatatttcaaatgaa
gccaatgcgaaagcgttaaaacacgcttacgatttatggaaaaaattagtgaagaaaaaa
gtaattgataattaccaattctcacaaaaaagttcattggtttcgacaactgttgattat
tctggtttcaaaactttagacgtcgtcgttgaggcgatcgttgaaaatatggacatcaag
aaaaaagtgatcgcagaaacggctaaaaatatgcgtgacgatgctatcatcgtaacaaac
accagctcgttatctgtgactgaaatgtctgaaggtcatccgcgccctgagtatttcgct
ggtatgcatttcttctctccagttcataaaatgcctttagttgaagttattcgaggacca
aaaacttcggatgaaacgatttctacagttttcgaattatcgaaaaaaatgggtaaaatg
ccagtggttgttaaagatggcccgggctttttagtaaatcgtttattattgccgtatatg
gcagaggctgctttcttattaacagaaggcatggatattgaaacggttgataaagcttac
gttaaattcggtatgccgatgggtccatttgaattaatggattcagtgggattagatgtt
tgtgcaaaagttttaaagatctttcgtaaagcttaccctgatcgcgtagaagtttctccg
atcatggaaaaactagaagcgaacaaaactcgtttaggtcaaaaaactaacttaggtttt
tacaaatatgatcacagcggtcgtaaaactgaagttgatcaaacggtttatgctgaactt
aatttaggagctcgcacgaagccctacgatgcacaagagtgcgttgagcgtggtgtgttt
gcgatgattaacgaatgctgtttagcacttgatgctgatcgcattgttgagactccacat
gaagtcgatcttgcgatgattatgggtacaggttttccaccgttcagaggcggattatta
aaatacgctgacagtatcggtgcaaaatacgtagctgagcgtttaactcactatgcagct
gctcgtaatgcaaaagcgcgtttatcaccaagtgttaaattagcagagcgcgcaagttca
ggtaagaaattttataattaa
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