Bdellovibrio sp. qaytius: CIK05_09630
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Entry
CIK05_09630 CDS
T05880
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
bdq
Bdellovibrio sp. qaytius
Brite
KEGG Orthology (KO) [BR:
bdq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bdq03009
]
CIK05_09630
Enzymes [BR:
bdq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CIK05_09630
Ribosome biogenesis [BR:
bdq03009
]
Prokaryotic type
rRNA helicases
CIK05_09630
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
Terminase_3
Phage_integrase
Terminase_6N
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AZZ37041
UniProt:
A0A3T0RSK8
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All DBs
Position
complement(1989018..1990409)
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AA seq
463 aa
AA seq
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MDSSFKLLKLSPEILAAIQNLGYSKMTPIQAASIPLLLEGHDLVGRSQTGSGKTAAFALP
ILQKIHKADKTPQALILAPTRELCEQILQEIRKFSKGLKNIQVMALVGGQSSSAQIKSLE
MGAQIIVGTPGRTLEFLRARLVEVDDLKTLVLDEADRMLDEGFTEEVTQIIELLPTKRQT
VFFSATFPESIEQLSLKYQKNPKTVSVLQEKTSAPMIEQFLYIAEKPEKIDTLMRILQQH
PANSVLIFCRTKASVAEINELLLEAKVATSALHGDLEQVQRDQTMARFRSGSLRVLVATD
VAARGIDIDHLELVINFDLPSTTDIYLHRIGRTGRAGKKGVAVSIADAFEATKVEELERV
MGKPFNRFELNLKGKAVIAKTLQQPKMKMIYISGGRKDKLRPGDVIGTLTSQPNAIAATD
IGKIELHDTFTYVAVSFAVAGKALQKLTTSKIKGHKYKASYIK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggattctagcttcaaacttttaaagttatcccctgaaattttagcagcgatccaaaat
ttgggttattcgaaaatgacccctattcaagcggctagtattcctctattgttagaaggt
catgacctagttggaagatcacaaacaggaagcggaaagacagcagcttttgcacttccg
attttacaaaaaatacataaagcagataaaactcctcaggcattaattttggctcctacg
cgagaactgtgtgagcaaattctgcaagagattcgtaaattttctaaagggcttaaaaat
attcaagtgatggctttagttggtggtcaatcatcgtcagcccaaattaaatctttagaa
atgggtgcgcaaattattgttggtactccggggcgtactttagagtttcttagagctaga
ttagttgaagtcgatgatttaaaaactttggtcttagacgaagccgatcgtatgttagac
gaaggcttcactgaagaggtcacacaaattattgaacttttacctacgaaaagacagacc
gtctttttttctgccacattccctgaaagtattgaacagctgagtctgaaatatcaaaaa
aatcctaagacagtcagtgtgttgcaagaaaagacatcggctccgatgattgagcaattt
ctttatatcgcagaaaaaccagaaaaaattgatacccttatgcgaattcttcagcagcat
cccgcaaacagtgttctgattttttgtcgcacgaaagcttctgttgctgaaatcaatgaa
ctcttgcttgaagctaaagttgcaaccagcgctttacacggtgaccttgagcaagtgcaa
cgtgatcagacaatggctcgatttcgcagtggcagtttgcgcgtactggttgcaacggat
gttgccgcccgtggtattgatattgatcatttagaattagttattaattttgatttgcca
tcgacgacagatatttatcttcaccgcattgggcgcacaggtcgcgctggtaaaaaaggt
gtcgcagtttcaattgcagatgcttttgaagcgacaaaagtcgaagaacttgaacgggtc
atgggtaaaccatttaatcgttttgagctgaatttaaaaggcaaagccgttatcgcaaaa
acattacagcaacccaaaatgaaaatgatttacatttctggtggtcgtaaagataaactt
cgcccaggtgatgttatcggtaccctgacttcgcaaccgaatgccatcgcagccactgat
atcggtaaaatcgaactgcacgatacatttacgtatgttgcagtttctttcgcggtcgca
ggtaaggctttgcaaaaattaacgacgagtaaaatcaagggccataagtataaagcttct
tatattaagtga
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