Bdellovibrio sp. qaytius: CIK05_10275
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Entry
CIK05_10275 CDS
T05880
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bdq
Bdellovibrio sp. qaytius
Pathway
bdq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bdq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CIK05_10275 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdq03019
]
CIK05_10275 (pnp)
03016 Transfer RNA biogenesis [BR:
bdq03016
]
CIK05_10275 (pnp)
Enzymes [BR:
bdq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CIK05_10275 (pnp)
Messenger RNA biogenesis [BR:
bdq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CIK05_10275 (pnp)
Transfer RNA biogenesis [BR:
bdq03016
]
Prokaryotic type
tRNA degradation factors
CIK05_10275 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
OB_PDCD11
KH-I_KHDC4-BBP
KH_2
OB_RRP5_4th
S1_RRP5
S1_2
Motif
Other DBs
NCBI-ProteinID:
AZZ37159
LinkDB
All DBs
Position
complement(2122002..2124098)
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AA seq
698 aa
AA seq
DB search
MVNTVTTSIAGKQITIETGRLAKQTDGSVLVTCGNNVVLVTAVSSKEAKPGQSFFPLTVE
FIEKYYAIGKIPGGYFKREGKPSNDSVLSARMVDRPIRPLFPEGYLNDTQVVATILSADG
SFSMDVLASLGASAALHISNIPFAGPTATCQVARVNGQFIANPTPEQLTQSDMDIIVSGT
KNGLLMVEGETKFISEADALAALKFGHQALMPLLQMQEELREKTGSVAKRKFTAATIDAD
FRTQAETLLTPMIQKALSQKIKQDRYAAFDAAKDAAVTQLVKTLTDEKLQAQRKSEVSTV
IEDIKYKVARAQILDTASRIDGRDLKTVRPIMCEVGLLPRAHGSGLFQRGETQCLATVTL
GTADDEQTVETLNGTVKRKFSLHYNFPPYSVGEVGRFGGQGRREIGHGNLAERSVKAVAP
DHAQFPYTIRIVSEVLESNGSSSMGSVCAATLAMLDAGIKVKTNIAGIAMGLIKEGDRVA
VLSDILGDEDHLGDMDFKVAGSSTGITALQMDIKIDSVSFAVMETALNQARDGRLFILGE
MEKVMKAPRGQMSEFAPRIETIKIKVDKIREVIGSGGKVIRSITEQTGVKIEIQDDGTIN
IASSDPAATKKAIAIIESICAEAEVGKVYKGKVMKIAEFGAFVEILPNTQGLLHISELAN
ERVRQVTDVLKEGEMIDVKVLEVDRSGRIKLSRKALMQ
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggtcaacacagttacaacgtcaatcgcaggaaagcaaatcacaatcgaaacaggacgc
cttgctaaacaaactgatggttcagttttagttacatgtggcaacaacgtagttttagtt
actgcagtttcatctaaagaagcaaaaccaggacaaagctttttccctttaacagttgag
ttcatcgaaaaatattacgctatcggaaaaattccgggtggttatttcaaacgtgaaggt
aaaccttcaaatgattcagtactaagtgctcgtatggttgatcgtccgatccgcccactt
tttcctgaaggttacttaaacgacacgcaagttgttgcaacaatcctttctgctgacggt
tcattctctatggacgtattagcttctttaggagcttcagcggcattacatatttctaat
attccatttgctggtccgacagcgacttgccaagttgctcgcgtaaacggtcaattcatc
gcaaatcctactcctgagcaattaactcaaagtgatatggacatcatcgtatctggaact
aaaaacggtttattaatggttgaaggcgaaacgaagtttatctctgaagcagatgcttta
gctgctttaaaattcggtcaccaagctttaatgccattattacaaatgcaagaagagtta
cgcgaaaaaacgggatcagtggctaaacgtaaattcacagctgcaactatcgatgctgat
ttcagaactcaagctgaaacattattaacaccaatgattcaaaaagccttatcacaaaaa
attaaacaagatcgttacgcggcatttgatgcagctaaagatgctgctgtgactcaacta
gtaaaaactctaactgatgaaaaacttcaagctcaacgtaaatctgaagtttctacagtt
attgaagacattaaatacaaagtagctcgcgcgcaaattttagatacagcttctcgtatt
gatggtcgtgatttaaaaacagttcgtccaatcatgtgtgaagttggtttattaccacgt
gcccatggttctggtttatttcaacgtggtgagactcagtgtttagcgactgttacttta
ggtacagctgatgacgaacaaacagttgagacattaaacggaactgttaaacgtaaattt
tcattacactacaacttccctccatactctgtgggtgaagtgggtcgttttggcggtcaa
ggtcgtcgtgaaatcggtcacggaaatttagctgagcgttcagttaaagctgttgctcct
gatcatgcgcaatttccttacacaatccgtatcgtatcagaagttttagaatcgaacggt
tcaagctcaatgggttcagtatgtgctgcaactcttgcgatgcttgatgctggtattaaa
gttaaaactaacatcgccggtatcgcgatgggcttaattaaagaaggcgaccgcgtagcg
gttctttctgatatcttaggtgatgaagatcatttaggtgatatggatttcaaagttgca
ggatcttcgactggtatcacagctttacaaatggatatcaaaatcgattcagtttctttt
gcagttatggaaacagcacttaaccaagctcgtgacggacgtttattcatcctaggcgaa
atggaaaaagtgatgaaagctccacgcggtcaaatgtctgaatttgctccacgtattgaa
acgatcaaaattaaagttgataaaatccgtgaagttattggttcgggcggtaaagttatc
cgttcaatcactgaacaaactggcgttaaaatcgaaatccaagatgacggtacaattaac
atcgcttcatctgatccagcagcaactaaaaaagctatcgcgatcatcgaatcaatctgt
gctgaagctgaagttggcaaagtgtacaaaggtaaagtaatgaaaattgctgaattcgga
gctttcgtagaaatccttccgaacacacaaggtttattacatatctctgagcttgctaac
gagcgcgtacgccaagtgactgacgttcttaaagagggcgaaatgattgacgtaaaagta
ttagaagttgatcgttctggccgtattaaactttctcgcaaagcattgatgcagtag
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