Bdellovibrio sp. qaytius: CIK05_12230
Help
Entry
CIK05_12230 CDS
T05880
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bdq
Bdellovibrio sp. qaytius
Pathway
bdq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bdq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CIK05_12230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdq03021
]
CIK05_12230
03400 DNA repair and recombination proteins [BR:
bdq03400
]
CIK05_12230
Enzymes [BR:
bdq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CIK05_12230
Transcription machinery [BR:
bdq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CIK05_12230
DNA repair and recombination proteins [BR:
bdq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CIK05_12230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HMD
Motif
Other DBs
NCBI-ProteinID:
AZZ38367
UniProt:
A0A3T0RW41
LinkDB
All DBs
Position
complement(2535236..2536231)
Genome browser
AA seq
331 aa
AA seq
DB search
MIKPKGFEIERDTQTSEYSKFIVKPLERGFGVTLGNSLRRILLSSMMGSAVTAVKLDGVL
HEFSTMPDVLEDVSDIILNLKQVRFRQHTAETFTLRINKKGPGVVTAADIVTNDKIEVLN
PHQHIATLGNNGSFSAELVVAYGRGYSPVENRSEQMAVGYIAVDALHSPIRKVNYAVSNA
RVGQRTDYDALTLEVWTDGSIKADEAVSLASKILKEQLQIFLTFDESLEPSDEIKSMGSS
SLNENLFRSVDDLELSVRSANCLKNANIRYIGELVVRSEAEMLKTKNFGRKSLNEIKEIL
VEMGLGLGMKIEGWPPPGWDPNVPPPAKRES
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
ttgatcaagccgaaaggtttcgagatcgaacgcgatactcagacttctgagtactctaag
ttcatcgttaagcctttggaaagaggctttggtgtaactcttggaaattctttaagaaga
attttattaagctctatgatgggatctgcggtaactgctgtaaaacttgatggagtttta
catgagttctcaacgatgccagatgttttagaagatgtttcagacatcatcttgaacctt
aaacaagttcgtttcagacagcacactgctgagacgttcactctacgtattaacaaaaaa
ggtccaggcgttgtaacggctgcggatatcgtaactaacgacaaaatcgaagttttgaat
ccacaccaacatatcgcaactcttggcaacaacggatctttctctgctgaattagttgtg
gcttacggccgcggttattctccagttgaaaacagaagtgaacaaatggcagttggttat
atcgctgttgatgctcttcactctccaatccgtaaagttaactacgcagtttctaatgct
cgtgttggtcaacgtactgattacgacgcattaactttagaagtatggactgatggttct
attaaggctgatgaagcagtttctttagcttcaaaaatcttaaaagaacaattacaaatc
ttcttaactttcgatgaatctttagagccgtctgatgaaattaaatcaatgggttcttct
tcattgaacgaaaacttattcagatcagttgatgatcttgagttaagcgtacgttctgcg
aactgcttgaaaaacgctaacatccgttacatcggtgaattagttgttcgttcagaggca
gaaatgcttaaaactaaaaacttcggtcgcaaatctttaaatgaaattaaagagatctta
gttgaaatgggcttaggtttagggatgaaaatcgagggatggccacctccaggatgggat
ccaaatgttccacctcctgcaaaacgtgaatcgtaa
DBGET
integrated database retrieval system
