Bdellovibrio sp. qaytius: CIK05_13070
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Entry
CIK05_13070 CDS
T05880
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bdq
Bdellovibrio sp. qaytius
Pathway
bdq03030
DNA replication
bdq03410
Base excision repair
bdq03420
Nucleotide excision repair
bdq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bdq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CIK05_13070
03410 Base excision repair
CIK05_13070
03420 Nucleotide excision repair
CIK05_13070
03440 Homologous recombination
CIK05_13070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bdq03032
]
CIK05_13070
03400 DNA repair and recombination proteins [BR:
bdq03400
]
CIK05_13070
Enzymes [BR:
bdq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CIK05_13070
DNA replication proteins [BR:
bdq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CIK05_13070
DNA repair and recombination proteins [BR:
bdq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CIK05_13070
NER (nucleotide excision repair)
GGR (global genome repair) factors
CIK05_13070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
MLKL_N
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AZZ37687
UniProt:
A0A3T0RU77
LinkDB
All DBs
Position
complement(2704935..2707553)
Genome browser
AA seq
872 aa
AA seq
DB search
MKKIYLVDVSSMFFRAFYAIRPLSSTKGVPVNAVYGFISMIIKLFKEKNPDHVVFCYDRK
EPSFRKDLYTEYKANRTTMPDDLQVQMPYLKQVADLFGIADIEVAGYEADDLIGTIAVQS
AKEGYQVYIVSGDKDFSQLVNENIFLYDTMKEFVYTAEAVKEKHGVYPEQFIDFLAITGD
TSDHIPGVAGIGPKGAQKLIEQFGTLEKIYENIDKVSPAGIKEKLIKSKDDAIISKKLVT
IVTDVNTGKTMDDYIVKDFKTEELRAFLQELNFKSFEKSLLGDGQANLKKGDGHKTSGAE
PNFATPAAPGPTVDEATTTAAPIAAAALKAQAWDSALVQARIKNEKFFVFTANAQICFCF
NNFDYFIAPLEQAQLDYKNLTWSGFDIKQVWSDINLSVEDVLTAQIDWDMMLLAYCLKSQ
DMLDPIEVIKDFLSIDLKPEAKQQVDIVKLAEAFVQLSIVVQTEIREKGLLPIYEKLEKP
LIPILYAMEKVGIKLDIETLAVFSKELTDDIAKLETEIHQIAGEKFNIASPKQLGVILFE
RLGLEALKKTKTGYSTDNEVLEKLNHPIGLLLMNFRELSKLKSTYVDALPEMVDANSRIH
THFNQAFTATGRLSSTDPNIQNIPIKTEKGRKVRQAFISDSGKKLLSLDYSQIELRVLAH
ISEDKGLIKAFQDDLDIHSATAAEVFNVPLNAVTKEHRRIAKAVNFGIAYGQGAYGLAEV
LGISRTESKDIIDRYFTKFSGIKDYIASTIEEAHQKKYVETLFGRRRYLKELESTNAMVK
KFGERAAINAPIQGTASDLMKMAMIDVNRWLVQDKAQLTLLLQVHDELIFEGAPDVLETS
VAHIRGIMENVAKFKVPLKVNSSIGDNWDQAH
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaatctatcttgttgatgttagttctatgttttttcgtgcgttttacgctatt
cgcccattgtcttcaaccaagggtgttccggttaatgccgtttacggttttatttcgatg
atcattaaactttttaaagaaaaaaacccagatcacgtggttttttgctacgaccgtaaa
gagccgtcatttagaaaagatttatacacagaatacaaagctaaccgcacaacaatgcct
gatgatctgcaagttcaaatgccgtacttaaaacaagtggccgatttatttggtatcgcc
gatatcgaagtggctgggtatgaagccgatgatttaatcggtacgatcgctgttcaatct
gccaaagaaggttatcaagtttatatcgtcagcggagataaagattttagtcagctcgtg
aatgaaaatatttttctctacgacacgatgaaagaatttgtttacaccgccgaagccgtt
aaagaaaaacacggtgtttaccccgaacaattcatcgatttcttagctattacaggtgat
acgtcagatcatattccaggagtagcgggcattggccctaagggtgcccaaaagctgatt
gaacaattcggaacactcgaaaaaatttatgaaaatatcgataaagtttctccggcgggt
attaaagaaaaattaattaaatcaaaagacgatgccatcatctcaaaaaaattagtcacg
attgtcaccgatgtaaataccggtaaaacaatggatgattacatcgtaaaagattttaaa
actgaagagctgcgcgctttcttacaagaattaaactttaaatctttcgaaaaaagttta
ttaggggatggccaagccaatctcaaaaaaggtgacggtcataaaacttcaggtgccgag
ccaaactttgcaacacccgcagctccaggcccaacagtagatgaggccactacgacggca
gcacccattgctgctgccgctttaaaagctcaagcctgggattctgcgcttgtacaagct
cgcattaagaatgaaaagtttttcgtattcacagcgaatgctcagatttgtttttgtttt
aataattttgattatttcatagctccacttgagcaggcgcaattagattataaaaactta
acgtggtcaggttttgatattaaacaagtctggtcagatataaacttatcagttgaagac
gtattaacagcccaaattgattgggacatgatgcttttagcttactgtttaaaatctcaa
gatatgcttgatcctattgaagtgatcaaagattttttaagcattgatttgaaacctgaa
gctaaacaacaagtagatatcgttaaattagccgaagctttcgtgcaattatccatcgtt
gtgcaaaccgaaattcgcgaaaaaggcttactgccaatctatgaaaaattagaaaagcca
ttaattccaattctctatgcgatggaaaaagtgggtattaaacttgatatcgaaacatta
gcagttttttcaaaagaactcactgatgatattgctaaattagagactgaaattcaccaa
atcgccggcgaaaaatttaatatcgcttcgccaaaacaattaggcgttattctttttgaa
cgtttaggtttagaggcccttaaaaaaactaaaaccggttattcaactgataatgaagtt
ttagaaaaactaaatcatccgattggtctgttattaatgaactttcgtgaattatctaaa
ttaaaatctacttacgttgatgcgttacctgaaatggtcgacgcgaactctagaattcat
acgcattttaaccaagcatttacggcaacaggtcgtctatcaagtacagatccgaatatt
caaaatattccgatcaaaacagaaaaaggccgcaaggttcgccaagcttttatctcagat
agcggtaagaagttattgtctctcgattattcgcaaattgaattacgtgtgttggctcat
atttctgaagacaaaggtttaattaaagcctttcaagatgatttagatattcactcggcc
acagccgctgaagtgtttaacgtgcctttaaatgctgttaccaaagaacatcgccgtatc
gcaaaggccgtcaactttggtatcgcctacggccaaggagcttacggtttagccgaagtt
cttggaatttcaagaactgaatcaaaagatattatcgatcgctattttacaaaatttagc
ggcattaaagattacatcgcttcaacaattgaagaagcacatcagaaaaaatatgtcgaa
acactttttggtcgtcgcagatatttgaaagagcttgaatcaacaaatgcgatggttaaa
aaattcggtgagcgcgcggctattaatgctccgattcaaggtacggccagtgatctgatg
aagatggctatgattgatgtgaatcgttggttggttcaagataaagcgcagttaacttta
ttattacaagtgcacgatgagttgatttttgaaggtgcgccagatgttttagaaactagt
gtggcgcatattcgtggcatcatggaaaacgtggctaagtttaaagtaccgttgaaagtg
aattcttcgattggtgataactgggatcaagcgcattag
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