Bdellovibrio sp. qaytius: CIK05_13420
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Entry
CIK05_13420 CDS
T05880
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase (aminomethyl-transferring)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
bdq
Bdellovibrio sp. qaytius
Pathway
bdq00260
Glycine, serine and threonine metabolism
bdq00630
Glyoxylate and dicarboxylate metabolism
bdq00670
One carbon pool by folate
bdq00785
Lipoic acid metabolism
bdq01100
Metabolic pathways
bdq01110
Biosynthesis of secondary metabolites
bdq01200
Carbon metabolism
Module
bdq_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
bdq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CIK05_13420 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CIK05_13420 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
CIK05_13420 (gcvP)
00670 One carbon pool by folate
CIK05_13420 (gcvP)
Enzymes [BR:
bdq01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
CIK05_13420 (gcvP)
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Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
GH97_N
Motif
Other DBs
NCBI-ProteinID:
AZZ37755
UniProt:
A0A3T0RUC9
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Position
2784646..2787513
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AA seq
955 aa
AA seq
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MTSSLDLNTSLSTLNTNSEFTGRHIGPSASDQQEMLTTLGFTNFDELMTKVVPKTIFSKE
KLNVGDGISEFEILNQLKKTVSENKVFRTLIGMGFHDTITPSPILRNIFENPVWYTAYTP
YQPEISQGRLESLLNFQTMIADLTGMEISNASLLDEGTAAAEALMMAHSLCKKKDVNTFV
VHPAAHPHVIEVLKTRAEPLNLEMIIADPLTYDFKKEIFAAIVQYPTTEGTIEDYKGLAT
KLHDHGAFAIAAVDLLALTLLTPPGEWGADIVVGNSQRFGVPLGFGGPHAAYLATKDAYK
RSLPGRLVGVSVDSHGKNALRLTLQTREQHIRREKATSNICTAQVLLANMAAMYGVYHGP
EGLKKIALRTHRLTQLAVAGLEKLGFKTTTTQFFDTVKIKTDKTAAIVSAAEKLEINLRV
YNDGVGFSINETCNHKLIEDLLTAFNGGQAITFKLADLEAGLKNQWNPEFVRKSDFMTHG
TFNRYHSETELMRYIYQLQNKDVTLTHSMIPLGSCTMKLNAATELIPVSWPEINKIHPFA
PSNQTLGYQKLIKDLEAKLCAITGFAAVSLQPNSGAQGEYAGLLVIREYYKARNELHRNV
CLIPSSAHGTNPASAVLAGFQVVVTACDENGNVDIADLKAKAELHKDKLAAMMVTYPSTH
GIFEEAITDICEIIHKNGGQVYMDGANLNALVGVAQPGKFGPDVSHMNLHKTFAIPHGGG
GPGVGPIGVGAHLAPYLPKHSLVKEAGPATGVSSTTSAPWGSASILPISWSYITMMGAAG
LKQATMTSILSANYIAKKLAPHYPIVYKGNEGLVAHECIIDIRPLKKSHEIDVTDIAKRL
MDFGFHAPTMSWPVIGTLMIEPTESESKREIDRFCEAMIQIRKEADACPDVIKNAPHTAE
ALLATEWNHKYTREVAAYPAPWVKTNKYWPPVGRVDNVYGDKNIVCSCPPLDSYT
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgacttctagtcttgatttaaatacatcactttctacccttaacacgaattctgaattt
acaggccgccacattggcccatcagcttctgaccaacaagaaatgttaacgactttaggt
tttacaaacttcgacgagttaatgactaaagttgtacctaaaacaattttctcaaaagaa
aaattaaatgttggcgatggtatttctgaattcgaaattttaaaccaacttaaaaaaaca
gtttctgagaacaaagttttcagaactcttatcggcatgggctttcacgacacaatcacg
ccgtctccgattttacgtaacatttttgaaaatccagtttggtacacggcctatacgcct
taccaaccagaaatttctcaaggccgcttagaaagtttattaaactttcaaacaatgatc
gcagatcttactggaatggaaatttcaaacgcttcgttattagatgaaggcacagctgct
gctgaagctttaatgatggcgcactctttatgtaagaaaaaagatgtaaatacatttgtg
gttcaccctgcggctcacccccatgtgattgaagttttaaaaacgcgcgccgagccttta
aatttagaaatgatcatcgctgatccattaacttacgattttaagaaagaaatttttgca
gcgattgttcaatacccaacaactgaaggtacaatcgaagattacaaaggtttagcaact
aaacttcacgatcatggtgcctttgctatcgcagcagttgatttattagcattaacttta
ttaactcctccaggtgaatggggtgctgatatcgttgtgggtaactcacaacgttttggc
gtaccattgggattcggcggccctcacgcagcgtatttggcaactaaagatgcttacaag
cgttctttacctggccgcctagtgggtgtgtctgtagattctcatggtaaaaatgcttta
cgcttaactttacaaacacgcgaacaacatattcgccgtgaaaaagcgacttcaaatatt
tgtacggctcaagtgttactagcgaacatggctgcaatgtatggtgtttatcacggccct
gaaggtttaaagaaaatcgctttacgcactcaccgtttaactcaattagctgtggctggt
ttagaaaaacttggtttcaaaacaacgacaactcaattttttgatactgtaaaaatcaaa
actgataaaacagctgcaattgtttctgctgcagaaaaattagaaatcaatttacgcgtt
tacaatgatggcgttggtttttcgatcaacgaaacttgtaaccacaaattaatcgaagat
ttattaacagctttcaatggtggccaagcgatcacttttaaattagctgatcttgaagct
ggcttaaaaaatcaatggaacccagaatttgtacgtaaatctgatttcatgactcatggt
acatttaaccgttaccactctgaaacagagttaatgcgctacatttatcaattacaaaat
aaagacgtaaccttaactcactcgatgattccacttggatcttgcacgatgaagttaaat
gcagccactgaacttattccagtttcatggccagaaattaacaaaattcatccgtttgca
ccaagcaatcaaactttaggttaccaaaaattaattaaagatttagaagctaaactttgc
gcgatcacaggttttgcagctgtttcgttacaaccaaactctggcgcacaaggtgaatac
gctggtctattagtgattcgtgaatattacaaagctagaaatgaattgcacagaaatgtg
tgtttaattccttcttctgcgcacggaacaaatccggcgtctgcagttcttgctgggttt
caagttgtcgtaacagcttgtgatgaaaacggtaacgttgatatcgcagatttaaaagcc
aaagctgaattacacaaagataaactagctgcgatgatggttacctacccatcgactcac
ggtatttttgaagaagcaatcacagacatctgtgaaatcattcacaaaaatggtggccaa
gtttacatggacggcgcaaatttaaatgcgttagtgggcgtggctcaaccaggtaaattc
ggaccagacgtatcacacatgaatttacacaaaacatttgcgattcctcacggtggtggc
ggaccaggtgttggcccaatcggtgttggcgcacatttagctccgtacttaccaaaacat
tcattagttaaagaagcaggcccagcaacgggcgtaagctctacaacgtcggctccatgg
ggttcagcttcgattttaccaatcagctggagctacatcacgatgatgggtgctgctggt
ttaaaacaagcgacaatgacttctattttatctgcgaactacatcgctaaaaaattagca
ccgcactacccgatcgtttacaaaggtaacgaaggtttagtagcgcatgaatgtattatt
gatattcgcccgttaaaaaaatctcatgagattgatgtgactgatatcgcaaaacgttta
atggatttcggctttcacgcgccaacaatgtcttggcccgtaatcggcacattaatgatc
gaaccgactgaatcagaatcaaaacgcgagatcgatcgtttttgtgaagcgatgattcaa
attcgtaaagaagctgatgcctgccctgatgttattaaaaatgcacctcacacagctgaa
gcacttttagcgactgaatggaatcacaagtacacacgtgaagttgccgcttacccagct
ccatgggttaaaacgaataaatactggccacccgttggccgcgtagataacgtttacggt
gataaaaacatcgtctgttcgtgcccaccattggactcatacacttag
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