Bdellovibrio sp. qaytius: CIK05_15615
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Entry
CIK05_15615 CDS
T05880
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bdq
Bdellovibrio sp. qaytius
Pathway
bdq03030
DNA replication
bdq03430
Mismatch repair
bdq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bdq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CIK05_15615
03430 Mismatch repair
CIK05_15615
03440 Homologous recombination
CIK05_15615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bdq03032
]
CIK05_15615
03400 DNA repair and recombination proteins [BR:
bdq03400
]
CIK05_15615
Enzymes [BR:
bdq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CIK05_15615
DNA replication proteins [BR:
bdq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CIK05_15615
DNA repair and recombination proteins [BR:
bdq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CIK05_15615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AZZ38166
LinkDB
All DBs
Position
3259940..3260551
Genome browser
AA seq
203 aa
AA seq
DB search
MRFIAFDLETTGTVPGVDRIVEIGAVLIDNGQVQAVFSTLINPQIPIPPGATAVNKITND
MVAGKPLIEDVLNSFAEFCGNEVMVAHNAPFDCQFLVADIKKFESTAPQGVVVDTLPMAR
KLIPGLANYKLGTLVQHFKVQASEFHRAEEDATYCGMVFWEMVKRLSVGNRAPQIENLIQ
LTGKTEFKFPQIERQPKQMGFLF
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgagatttatagcatttgacttagaaactactggaacagttcctggcgtagaccgaatc
gttgagatcggtgccgtacttattgataatggccaagttcaggctgttttttcgacttta
attaatccacaaattccaattccgccaggcgctacagcggtgaataaaatcactaatgat
atggttgctggtaaaccgttaatcgaagatgtcttaaattctttcgcagaattttgcggc
aatgaagtcatggttgcgcacaatgcgccgtttgactgccagttcttagtggctgatatc
aaaaaatttgaatctacagcgcctcaaggtgttgtggttgatacattaccgatggctcgt
aaacttattccaggtttagctaattacaaattaggtactctggtgcagcattttaaagtt
caagcttctgaatttcacagagctgaagaagatgcgacttactgcggaatggttttttgg
gagatggttaaacgtttatctgtaggtaatcgcgcaccacaaatcgaaaatctaattcaa
ttaacaggcaaaactgagtttaaatttcctcagatcgaacgccaacctaaacaaatgggt
ttcttattttaa
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