Bactrocera dorsalis (oriental fruit fly): 105221818
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Entry
105221818 CDS
T09719
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
bdr
Bactrocera dorsalis (oriental fruit fly)
Pathway
bdr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bdr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105221818
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdr03019
]
105221818
Messenger RNA biogenesis [BR:
bdr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105221818
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
105221818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
105221818
NCBI-ProteinID:
XP_011197238
UniProt:
A0A6I9UK80
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Position
1:complement(8413279..8424175)
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AA seq
1008 aa
AA seq
DB search
MAATRKLQGEIDRCLKKVAEGVETFEDIWKKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKSWIASGEIKDKSQLLENRRLIETQMERFKIVERETKTKAYSKEGLGAAQKTDPAQRK
KDEARNWLTSSISSLQLQIDQYESEIESLLAAKKKRLDRDKQDRMDEFRAKLDRNKFHVM
KLETVLRLLDNDGVEAEQVNKIKDDVEYYIESSQEPNFEENEFLYDDIIGLDDVELSGTG
VSLGIPSSATTDSNNSNETSGSPSSITSGGSPVQSPAPATGTQQQQQVQQQSAATAAAAA
TTTLTSTINTTAAAVTTAQQQQQQQSNNSNSMNYAAEAAAAAAAATATATNNTDVTASDK
RNKNESNSSSKTKQPVKPTAVRAANSTGKSSSGTTSETSSNKAVSSTPNKNHNQQQQQQP
TAAAIVAASMGGQAAPTSVTSTANSIVGGAPTLAATVAAMAAGHSPALQQHAPAPSLNAT
NATATVGGGATTVAAAVVANNGSSNSNNNIQGQSVIQATPTIAFAAVAKNNTSHLENGPV
HPATSYAMTAPTVATNSQHQQQQQLSNLQTNSSHLQNAHNNTSNNNASNSLANAVQQGSA
AVAAAAAAAGVVVNNVGSNNLVNCISPNGMSQVIGAQQQQQQQQQQQQVIGVTNNGSRVS
PGLLSPKHMNGMPVSAPNINNNNNNNNNNNSMDAISLKTMAQEAINRSVIDTNSLTQGPG
QQIDNRQQQQQQQQQQAPQSQQVLQHFSTDTTANQQQQQQQQQQQQQQSGGLAAAAVAFA
AAAAATNGPASAGAGPVGSAVQSGLGGMTNTAVGQPGAGNSGVNAPVGSKPLQQQQQQQQ
QPTNEAHITPLLGVAPLGTLPLHKDHQLQFKMMEAAYYHLPTPADSERLNIYLPRTPVPT
PLHFPQQQLPLYDTVEFYQRLSTETLFFVFYYMEGSKAQYLAAKALKKQSWRFHTKYMMW
FQRHEEPKIINDDYEQGTYIYFDYEKWSQRKKEGFTFEYKYLEDKELN
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacgagaaagttgcaaggtgaaatagacagatgtctgaaaaaagttgcggaa
ggggtggaaacattcgaggatatatggaaaaaagtgcataatgctacaaacagtaatcag
aaggaaaagtatgaagcagatcttaaaaaagaaatcaagaagttgcaaaggcttcgagat
caaattaaatcatggattgcatctggggagattaaagataaaagccagctgctggagaat
aggcgtctcattgaaacgcaaatggaacgtttcaaaattgtagaacgtgaaacaaaaacg
aaagcgtattcaaaagagggacttggcgctgcacaaaaaacagatccagctcaacgtaag
aaagatgaggcgcgcaactggttaacatcgtctattagttcattgcaattgcaaatagac
caatatgaaagtgagattgaatcgttactggcggcaaaaaagaagcgcctcgaccgcgac
aaacaagatcgaatggatgagtttcgcgccaaattggatcgtaataaattccatgttatg
aaactggaaacagtgttaagattactggataatgacggtgttgaagcagaacaagtaaac
aaaattaaggatgatgttgaatattacattgaatcctcacaagagcccaatttcgaagag
aatgagtttctttatgatgacattattggcttggatgatgtggagttatctggcacaggt
gtttcacttggtattccatcatcagccactaccgacagcaataacagcaacgagaccagc
ggttcgccaagcagtataacatcggggggcagtcctgtgcaatcgccagcgccagcaacg
ggtacacaacaacagcagcaagtgcaacaacagtctgcggcaacggcagcggcggcggcg
acaacgacattgacgtctacaattaatacgacggcagcggcggtgacaacggcgcagcag
caacaacagcagcaaagtaataacagcaacagcatgaattacgcagcggaagcggccgcg
gcggcggcggcagccacagcaacggcgaccaataatacagatgtgacagccagcgataaa
aggaacaaaaacgagagtaattctagtagcaaaacaaaacaacctgttaaaccaacggca
gtgcgtgcagctaatagcaccggtaaatcttctagcggtacaacatcagaaacgtcttca
aataaagcagttagttcgacgcccaataagaatcataaccaacaacaacagcaacagcct
acagcagcggcaattgtcgcagcatctatgggtggtcaagcagcgccgacgtcggtaacc
agcacagcaaatagcatagttggtggtgcgcccacattggccgccaccgtcgccgccatg
gctgccggtcatagtcctgcgctgcaacaacatgcgccagcgcccagtttgaatgcgaca
aatgcaacggcaacggttggtggtggtgcgacaacggtcgcagccgcagtggtggctaac
aatggtagcagtaacagtaacaacaacattcaaggccaatctgtgattcaagcgacgcca
acaattgcatttgcggccgtagcgaaaaacaacacatcacatcttgagaacggacctgtg
catccggcgacatcttacgcgatgacggctcccacggtagcaaccaattcgcagcatcag
caacaacaacaattatccaatcttcaaacgaattcctcacatttacaaaacgcgcataat
aacacttccaataacaacgcatcaaatagtttagcgaacgctgtgcaacaaggaagcgca
gccgttgccgcagccgctgccgctgccggtgttgtggtgaataatgttggcagtaataat
ttggtaaactgcatttctccaaacggtatgtcgcaagtaataggagcacagcagcagcag
cagcaacaacaacaacaacagcaagttattggtgtaacaaataatggctcgcgagtttcg
ccgggcctgctgtcgccgaagcatatgaatggcatgcctgtgtccgcacccaacattaat
aacaataataataacaacaacaacaataattcgatggatgcgatttcattgaagacaatg
gctcaggaagctatcaatcggtcggtaatcgataccaattcattgacgcaaggccccgga
caacagattgacaataggcagcagcaacagcaacaacaacaacagcaagcgccacaatca
caacaggtcttacagcatttctcaaccgatacaactgccaaccaacaacagcaacaacaa
caacagcagcagcaacaacaacaatccggcggtttagcagcagcagcagtagcctttgca
gcagcagcggcagcaacaaatggaccagcatcagcgggtgcgggcccagtcggtagtgca
gttcaaagtggtttaggcggtatgacgaatacagcggtgggtcaaccgggcgctggtaat
agcggtgttaatgcaccagttggtagcaagccactgcaacagcaacaacaacaacaacag
cagcctacaaatgaagcgcatataacgccgctacttggcgtagcaccgctgggcacatta
ccgctacataaagatcatcaattacaattcaaaatgatggaagccgcttactatcacctc
ccgacaccagccgactcggagagattgaatatatatctgccgcgaacgccagtgccgaca
ccactgcattttcctcagcaacagcttccactctacgataccgttgaattttatcaacga
ctctcaaccgaaacgctcttctttgttttctattatatggaaggttcgaaggcgcaatat
ttagcagcgaaagcattgaaaaagcaaagctggcgatttcacacaaagtacatgatgtgg
ttccaaaggcatgaggaaccaaaaattattaacgatgattacgaacagggtacgtacatc
tattttgattacgagaaatggagtcaacgcaaaaaggagggatttacttttgaatacaag
tacttagaagacaaggagttgaattga
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