Bactrocera dorsalis (oriental fruit fly): 105221905
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Entry
105221905 CDS
T09719
Name
(RefSeq) cleavage and polyadenylation specificity factor 73
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
bdr
Bactrocera dorsalis (oriental fruit fly)
Pathway
bdr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bdr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105221905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdr03021
]
105221905
03019 Messenger RNA biogenesis [BR:
bdr03019
]
105221905
Transcription machinery [BR:
bdr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
105221905
Messenger RNA biogenesis [BR:
bdr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
105221905
U7-dependent histone pre-mRNA processing factors
105221905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Motif
Other DBs
NCBI-GeneID:
105221905
NCBI-ProteinID:
XP_011197348
UniProt:
A0A6I9V3Z5
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MSQRNDDRVPAEESDLLQIKPLGAGQEVGRSCIMLDFKGKKIMLDCGIHPGLSGMDALPY
VDLIEADEVDLLFISHFHLDHCGALPWFLMKTSFRGRCFMTHATKAIYRWMLSDYIKISN
ISTEQMLYTEADLEASMEKIETINFHEERDVMGVRFCAYNAGHVLGAAMFLIEIAGVKIL
YTGDFSRQEDRHLMAAEIPPVKPDVLITESTYGTHIHEKREDRENRFTSLVQKTVQQGGR
CLIPVFALGRAQELLLILDEYWSQNPELHEIPIYYASSLAKKCMAVYQTYINAMNDKIRR
QIAVNNPFVFRHISNLKGIDHFDDIGPCVVMASPGMMQSGLSRELFENWCTDPKNGVIIA
GYCVEGTLAKTILSEPEEITTLAGQKLPLNMSVDYISFSAHTDYQQTSEFIRLLKPQHVV
LVHGEQNEMSRLKMALQREYEADTTTNIKFYNPRNTHSVELYFRGEKTAKVMGNLAATKP
EVGNKLSGVLVKRDFKYHLLAASDLSKYTDMSMSVVTQRQSIPWNSSLSTLKLLLDRIGG
AGTTEVLEEEKRIRAFKCIDLSVEGKIIIMEWQATPVNDMFADSVLACIMQTEMGGTNIK
GTTAIAKSDRTHFNECLVETLQDTFGEHSVPKMFKGDVLPVTVAGKRAEVNLETLQVHCP
EDESLRQIVNTAVQKLHQALVTLP
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaacgtaatgatgatagagtaccggcagaagaaagtgaccttcttcaaattaag
ccacttggggccggtcaagaagttggaagatcttgtataatgcttgattttaagggaaag
aagatcatgcttgattgtggtatacacccgggcctatccggtatggatgcattgccttat
gtagacttgatagaagctgatgaagttgatctcctctttatatcgcattttcacttggat
cactgcggtgcgctgccatggtttctaatgaagaccagttttcgtgggcgatgctttatg
acacacgccacgaaagctatataccgttggatgttatcggattacataaagattagtaac
atttccacagagcaaatgctctacactgaagccgatttggaggcgtctatggaaaaaata
gaaactataaatttccacgaagaacgtgacgttatgggtgtacgcttttgtgcatacaat
gcaggacatgtactcggtgctgctatgtttctaattgaaattgccggcgtgaaaatactt
tacacaggcgacttttctagacaagaagatcgccatttgatggctgccgagatcccacct
gttaaacccgacgtcctcataacggaatcaacctatggcactcatattcatgaaaagcgc
gaagatcgtgaaaacagatttacatcattggtgcaaaagacggtacagcagggtggtcgt
tgcttgataccggtctttgctttaggacgcgctcaagagttgctacttatactagacgaa
tattggtcacagaatcctgaactgcatgaaatacccatttactatgcatcatcgctggct
aagaaatgcatggctgtatatcaaacatatattaatgccatgaatgacaagatacgacgc
caaatcgctgtgaataatccatttgtgtttcgacacatttcaaacctgaaaggcatagat
catttcgacgacattggcccctgtgttgtgatggcgtcacctggtatgatgcaaagcggt
ttgtcgcgagaattattcgaaaattggtgcacagatccgaaaaatggcgtcattattgct
ggctactgtgttgaaggtacattggctaaaaccatactgtctgaaccagaagaaattacg
actttggcgggacaaaagttgccattaaatatgtctgtggattatatttcattttctgca
catactgactaccaacaaaccagcgaatttatacggctactaaaacctcaacatgtggtt
ttggttcatggtgagcagaacgaaatgtcccgtcttaaaatggcactgcagcgtgaatat
gaagccgatactaccacaaacatcaaattctacaatccccgaaatacacattccgtggag
ctatacttccgtggcgaaaaaaccgccaaagtaatgggtaatttagcggctacaaagcca
gaagttggtaataaattatctggagttctggtgaaacgcgacttcaaataccatctgctt
gcagcttctgatttgtcgaaatacaccgacatgagtatgtccgttgtaacacagcgtcaa
tccataccctggaatagttcgttaagcaccttaaagttactgttggatcgaattggtggt
gccggcacgacagaagtactagaggaagaaaaacgtattcgcgcatttaagtgcatcgac
ttatcggtggagggaaaaataattataatggagtggcaggcaacgcccgttaacgatatg
ttcgccgactccgtactcgcttgcataatgcaaactgaaatgggtggtactaacattaag
ggcaccacggctatagccaaatcggatcgcacacattttaatgaatgtttagtggaaaca
ctgcaggatacatttggcgagcattcagtaccaaaaatgttcaaaggcgatgttttgccc
gttacagtggccggaaagcgcgccgaagtgaatttggaaacactgcaagtgcattgcccg
gaagatgaaagtttgcgacaaattgttaatacggcagtacaaaaattacatcaagccttg
gtcaccctgccataa
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