Bactrocera dorsalis (oriental fruit fly): 105223074
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Entry
105223074 CDS
T09719
Name
(RefSeq) zinc finger protein swm
KO
K13192
RNA-binding protein 26
Organism
bdr
Bactrocera dorsalis (oriental fruit fly)
Brite
KEGG Orthology (KO) [BR:
bdr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bdr01009
]
105223074
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdr03019
]
105223074
03041 Spliceosome [BR:
bdr03041
]
105223074
Protein phosphatases and associated proteins [BR:
bdr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105223074
Messenger RNA biogenesis [BR:
bdr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
105223074
Spliceosome [BR:
bdr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
105223074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup35_RRM_2
RRM_Nup35
PWI
RRM_1
zf-CCCH
zf_CCCH_4
Fes1
UBR4
Motif
Other DBs
NCBI-GeneID:
105223074
NCBI-ProteinID:
XP_011198987
UniProt:
A0A034WNH9
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All DBs
Position
1:43510116..43524067
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AA seq
1090 aa
AA seq
DB search
MIVKNQEALKSWLVVVLEPLCDADSSALARYVLALLKKDKPEKELKKLMIEQLDVFLGEE
TQPFVERLFSAINTEDYFTDILLPSPKLSGGNFVGEEVAPDIIDTRNVSVEGANITEPPL
KIDNLPNTVCADKVQTPPKDDNKEKELLGSSTISANLKSDTTSQIVHYPATIKSETPPSI
PTHYSQAGSNSHHVRSASPPPRTIADKENQPRESRRRRASLRSRSRSRSRSRSNERHSRR
SRSRDRRINEREKMQRQFRNKSPPTIDLRHVGSHDRRRGAGGSGTERRRIGNSSNMTGSD
ERSPRFVVGNGGEGVGRKNRLNRSNSRSRSPSLERGGRNKVSPNVSRIVRGSPDRHANHT
HLQHESEKRQRCRDFDEKGYCVRGETCPWDHGINPVVFEDINNTGLIGMSLPEYNPDAPD
LWMRSSGSMVSSNPLLTGGSTVSGPVNASGINPFTGVARSGGIMPVSGVVAAVGFPPLGT
IADKQNNPGSIAADYTANTNAGSGFRVATPMLSFPFNSSAVSAPLQRELIPIPVVDAGNP
GSGGDVSQMTQGKRRFDLEDSVAIAEGPVKRKLPLNSRLGPRLPSIQSNCSLELRKIPRG
MNTIAHLNNHFAKFGKIVNIQISYDGDPEAAIVTFSTHAEANVAYRSTEAVLNNRFIKVF
WHSQDTNSLINDMAPITMGNIRKNSQYHLNNVPAVPTPAADSAKTPNENVSNPSITASGS
IPACDTSNATNVNTPLAAAHVPATSLRLKNNVSRSHNSGSTNAIIRKKQEEQAKAVVQLA
NGLRKRKQELLQSYVKQMKSALEIVERCEPNDPQRTKTLDTIKVLQETIDKLRKEIATEQ
EQIQAQIQNQHPIPPKKTKEQQKKELLDIELELIAQQQEGNDTTAIQKRIEELQRSLGVV
PGSAAVGIVSSHPLPIGSKVPHFPSGRTNPRSRPSFPEGSTRVDRRPKTIVVTGFTSEEA
DFVLGHFKHFGEITKHDVDKEIPQLILSYATRINAEQAVLRGKVFKDKRLQITWAPVIST
SSVTTGVLLTDKVYKPDEKLGSHDPIKSTASQISNDKQSNDSEVGGETLPELRLEDEEED
EESEDRTWRR
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtaaaaaatcaggaagctctgaaaagctggcttgttgtcgtattggaaccttta
tgtgatgcggattcttctgcgcttgcccgctatgtgttagcgttgcttaagaaagataaa
ccagaaaaagaattaaaaaaattaatgatagaacaacttgatgttttccttggtgaggaa
acacaaccttttgtagagaggctatttagtgccattaacactgaggattattttactgat
attttactaccctcaccaaaattaagcggtggaaattttgttggggaagaagtcgctccc
gatattattgatacaagaaatgtatctgttgaaggagcaaacattacagaacctccattg
aaaattgataacctgccgaataccgtttgtgccgacaaagttcaaactccaccaaaagat
gacaataaagaaaaagaattactcggcagtagtacaatatctgctaatttaaaatctgat
acaacgagccaaattgttcattaccctgctacaattaaaagtgaaacgccaccatctatt
cctacacactattctcaagctggatctaacagtcatcacgttcgcagtgcaagtcctcct
ccgaggactattgctgacaaagagaatcaaccgcgagagagccgtcgtcgtcgtgcttcc
cttcgatcccgttcgcgatcacgttctcgatcacgatctaatgaaagacattcgcgtcga
agtcgttctcgtgatcgcagaataaatgagcgtgaaaaaatgcaacgtcaatttcgcaat
aaatctccaccaacaatagacttacgtcatgtaggatctcatgatcgtaggcgaggtgct
ggcggtagtggaacggaacgtagacgtattggtaacagtagcaacatgacaggttcagac
gaaagatcaccccgttttgtagtaggaaacggtggagagggtgttggtcgtaaaaaccga
ctgaaccggtcaaattcacgcagccgttcgccttctcttgaacgtggaggcaggaataag
gtatcaccgaatgtatcacgaatcgttcgcgggtcgcctgatcgtcatgctaatcataca
catttacaacatgaatcagaaaagcggcaacgatgccgtgattttgacgaaaaaggttac
tgcgttcgaggagaaacatgcccttgggaccatgggattaatcccgttgtatttgaagat
ataaataataccggcttaattggaatgtcccttccggaatataacccagatgcacctgat
ttatggatgagatcttctggatcaatggtttcttctaacccgctattgacaggtggatcc
acagtaagtggtcctgttaatgcctcaggtattaatccattcactggtgtagcgaggtca
ggaggaataatgccggtttctggagttgtagcagccgttgggtttcctccacttggtact
attgcagataaacaaaataaccctggttcaattgcggcagactacactgcaaataccaac
gctggctccggttttagagttgctaccccgatgctttccttccctttcaattcttcagcc
gtttcagctccattgcaacgagaattaattccaattcctgttgttgatgcaggtaaccct
ggatcgggtggagatgtaagtcaaatgacacagggtaagcgtcgttttgatttagaagac
tcggtggctattgctgaagggcccgtcaaacgtaagctgccacttaacagtcgtcttggt
ccgcgtttaccaagtatacaaagtaactgttctctggagttacgaaagattccccgcggc
atgaatacaatcgcacatcttaataatcactttgctaaatttggcaaaattgtaaatata
caaatttcttatgatggtgatcccgaagcagctattgtaacgttttcaacacatgccgaa
gcaaatgttgcataccgtagtacagaagctgtgctaaacaatcgctttataaaagtattt
tggcacagccaagatacaaatagtttaataaatgatatggcccctattacaatgggtaat
atacgaaaaaatagtcaatatcatttaaataacgtcccagctgttccaactccggcagct
gattcagcaaaaacaccgaatgaaaatgtttcaaatccgagtattactgcgtctggaagc
atacctgcatgtgatacatcgaacgcaacaaacgttaacactcctctagctgccgctcat
gtacccgcaacatctttgcgattaaaaaataacgtatcacgtagtcacaactctggttca
acaaatgccataatacgtaagaaacaagaagagcaagctaaagctgttgtacaactcgct
aatggactacggaaaaggaaacaggaactattacaaagttatgtaaaacagatgaaatct
gctttggaaatagtagaacgttgcgaaccaaatgacccccaacgaactaaaacccttgac
actataaaagtcttgcaagaaactattgataaattacgtaaggagattgccacggaacaa
gaacaaatccaagcacaaattcaaaaccagcatccaattccaccaaagaaaacgaaggag
caacaaaagaaggaattgctggatatagaattggaactaatagctcaacaacaggaggga
aatgatactaccgccatacaaaagcgcattgaagaactgcagcgcagtcttggggtcgtt
cctggtagtgcagccgttggtattgtgtcctctcacccgttaccaatagggagcaaagtt
cctcacttcccctctggaagaaccaatccccgatctcgtccatcatttcctgagggatct
acgcgcgttgaccgaagaccaaaaacgatagtggttactggttttactagtgaggaggcg
gatttcgtgttaggacactttaagcattttggagaaataactaaacacgatgtggataaa
gaaataccccaactaatattatcctatgctacacgaataaatgcggagcaggctgtattg
cgtggaaaagttttcaaagataaacgactgcagataacctgggcaccagtcatatcaaca
tcatcggtaactacgggagttttgttaactgataaggtgtacaaaccagatgaaaagtta
ggtagtcatgatccaataaaatcaactgcatctcaaattagtaatgataaacagagtaat
gattctgaagtcgggggagaaacattaccggaattgcggcttgaggatgaagaggaagat
gaggaatctgaagatagaacatggcgacgctga
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