Bactrocera dorsalis (oriental fruit fly): 105223563
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Entry
105223563 CDS
T09719
Name
(RefSeq) nuclear pore complex protein Nup88 isoform X1
KO
K14318
nuclear pore complex protein Nup88
Organism
bdr
Bactrocera dorsalis (oriental fruit fly)
Pathway
bdr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bdr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105223563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdr03019
]
105223563
Messenger RNA biogenesis [BR:
bdr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105223563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup88
DUF4798
DUF364
Motif
Other DBs
NCBI-GeneID:
105223563
NCBI-ProteinID:
XP_049310430
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All DBs
Position
4:11430455..11516032
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AA seq
735 aa
AA seq
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MFNARTDTLKLNQTAMFAKIRAGLPVERQHTQNLLECKDDMLYAWDSEECCLLAVNWRLA
ALEGFEAVKYQNLIPSVPQSFQVERVVASSEGSLIALAGARGVTVLELPRRWGKDGLFME
GKEKITCRAFNLDSLLFSNNPHLELRQLRWHPFSPTDSHLLVLLSDNTIRVYDNSTLRHV
WKVGPVPMKSDNNLNSSLPTALLLGEFAVDFDIAPAVAPKEDAVLNSSTTINNNTTKDVL
NHSRNLSKAFNETVAGNQKNAQNSERIEWPIIVLRENGNIYVLMAGLDSHKPRLQGPLTI
TPQSNDNYGLESCAILVIPSLPPTLVIAEANGTLHHALFLEAEEADESFNEVDASLIIHP
SEYTIHVLETVLLELGLPKDDPKSKTYNCPIHLKRDYINEMRYFAYHNAGLHAITINFIS
ELQRFVESDVDSDISPLSIASNAEYIVCTKIDASERINAVLGFVLLQMPSGVVLLLGSGE
VISLKLIIDPKILVETVKIKEETDKSLPKLEAKSELDRMLEPSFVDHIKSMLKRDVTQPI
LSVDKTSTPNPQECYELLTQAIEVLRTQYLKRHELVRAEITKRVNTIKLRKEQQEHEIAD
LEKERENIRETAHRLAERFEEISDQQEIITKKCQHLVRQAHTRLPTNPIADKEFAQEVER
INKETKALTNSMQKARDTINKQTYHISKYNQTAKKKTFHLPERQEKNIKEILMQIAAEVD
SQIRDVKHINQQLGV
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacgcacgcacggacacgttgaaactaaatcaaaccgcgatgtttgctaaaata
cgcgccggtttgccggtggagcgccagcacacgcaaaatttgctcgaatgcaaggatgat
atgctgtacgcgtgggattcagaagaatgttgtttattggcggtgaattggcgtctggcc
gcattggaaggcttcgaagccgtcaaatatcagaatctcataccatccgtgccgcaaagc
ttccaagtagaacgtgttgttgcctcgtcggaaggctcactcattgcgctcgccggtgcc
agaggtgtcaccgtgctcgagctgccgcgacgctggggcaaagatgggctcttcatggaa
ggcaaagagaaaatcacatgtcgcgcatttaatttggactcgctactgtttagcaacaat
ccacacctggaactgcgtcagctgcgttggcatccattttcgcctaccgactcacatctg
ctcgtgctgctgtcggacaatacaatacgcgtttatgataattccactctacgtcacgta
tggaaagtcggcccagtgccgatgaagtctgacaataatctcaatagttcactaccaacg
gccctactgcttggtgaatttgctgtagattttgatatagctcctgctgtagccccgaag
gaagatgcagtcttgaactcttcaacaactattaataacaacaccacaaaggatgtgcta
aatcatagtcggaatctgtcgaaggcctttaatgagactgttgcaggaaatcagaaaaac
gcacagaattccgaacgcattgaatggcccattattgtgctgcgtgagaatggcaatatt
tatgtactaatggccggactagatagtcataaaccacgcctacaaggcccacttacaatt
acgccgcagagcaacgataattatggcttggaatcgtgcgccattttagtcattccatct
ctgccgcccacactggtcattgccgaagcgaatggcacgctgcatcatgcactatttctc
gaggccgaggaggcagatgagtcctttaacgaagtagacgccagtttgatcatacatcca
tctgaatacacgatacatgtgctagagacagtattgctggaactgggcttaccaaaagat
gatccaaaatcgaagacctacaattgtcctatacatttgaaacgcgattacatcaatgag
atgcgctattttgcctatcacaatgccggactgcatgcgataaccattaatttcatctct
gagctgcagcgtttcgtagaaagtgatgtcgactccgacatcagtccactctccatcgcc
tcgaatgccgaatatatcgtgtgcactaaaatcgacgccagcgaacgtattaatgccgta
ctcggctttgtactactccaaatgccttcgggcgttgttctactactcggcagcggtgaa
gttatcagcttgaaactcatcatcgatccaaaaatacttgtggaaacagtgaaaattaaa
gaggaaaccgataaatcattaccgaaattggaagccaagtctgaattggatcgcatgttg
gagccctcttttgtggatcacatcaaaagcatgcttaagcgtgatgtcacccaacccata
ctctcagtggacaaaacaagcacaccaaatccgcaggaatgctatgagctgctcacacaa
gccattgaggttctgcgcacacagtatttgaagcgacacgaattggtgcgcgctgaaatc
acaaagcgtgtgaacaccattaagttgcgtaaagagcagcaggaacacgagattgccgat
ttggagaaggagcgtgagaatatacgcgagacagcgcatcgactggccgaacgttttgag
gagatcagcgatcagcaggagatcataacgaagaaatgccagcatcttgtgcgccaggca
catactcgtctacccaccaatccaattgctgataaggaattcgcccaggaggtggaacgt
atcaataaggagactaaagccttgacgaattctatgcagaaggcgcgcgataccatcaat
aagcaaacttatcatatctccaagtataatcaaaccgctaagaaaaagaccttccattta
ccagaacgtcaagagaagaacattaaggagatacttatgcagattgccgccgaagtggac
tcccaaatccgtgatgtcaagcatatcaaccaacagcttggtgtttaa
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