Bactrocera dorsalis (oriental fruit fly): 105223911
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Entry
105223911 CDS
T09719
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
bdr
Bactrocera dorsalis (oriental fruit fly)
Pathway
bdr04382
Cornified envelope formation
bdr04512
ECM-receptor interaction
bdr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bdr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105223911
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105223911
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
105223911
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bdr04147
]
105223911
00536 Glycosaminoglycan binding proteins [BR:
bdr00536
]
105223911
Exosome [BR:
bdr04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
105223911
Glycosaminoglycan binding proteins [BR:
bdr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105223911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
105223911
NCBI-ProteinID:
XP_049318066
LinkDB
All DBs
Position
Unknown
AA seq
1833 aa
AA seq
DB search
MKLPRGHLGLLGGGAQRRLTHTYAWSLIFAMYLIAFVENDYSLADARESGKNCNNTVCDC
KGLKGRPGAIGLKGYPGIEGPPGDVGPIGPFGRRGEYGDPGEYGEQGEKGHRGDMGELGL
PGRPGITGPAGEDGPKGISGIDGCDGKPGQQGLPGSPGLNGQRGSIGKPGPPGPTGDAGE
GGINSKGTKGNRGVQGPDGVDGQPGYIGMKGYKGDIGYPGIEGSKGEQGFKGYKGDMAEP
ANLLLFGEGQLGEKGEPGDGEESPLIIGVAIKGYKGDQGLLGMTGITGATGETGELGNDG
LPGQIGETGEPGERGKPGKAGEPGIPGEKGAKGAPGYNGLDGEDGLKGEVGDDGFDGFPG
EQGPTGPPGIYDPNLDKSFPGPQGPQGDIGPLGNPGLPGIPGKQGRRGPFGPAGPPGDRG
LDGSPGRRGVSVIGDDGDYGYMGAPGPMGPPGNPGLPGRPGQVGQPGLNLMGPKGFAGRL
GLPAPNGFRGDRGEVGLPGDKGEPGDGVNIVGPPGFEGPPGIRGPPGVDGNPGWPGEFGA
KGIRGDDCGICPAGPKGTKGIPGDTGYPGVHGARGPVGLTGERGPKGWPGSPGPKGRIGI
PGLPGASGGMGRPGIPGRPGSQYPINNIEKPERGDLGEAGERGEQGETGDIGFNGRPGIR
GAKGETGLRGDYGDMGRPGKDGFPGRPGRDGKRGLDASMPKFYLIGESGRDGRIGERGEP
GSEGPKGDKGEPNPGQIYDNKGEVGDVGLIGLVGDKGFKGLKGQKGIYGLTGDIGLAGLT
IQGEVGAKGWPGSTGDYGSHGVPGNPGLNGLPGLDGLVGLKGYRGDPGRSVLPGEIGPDG
NPGIKGEQGDIGWPGSPGPAGTPGIKGVKGAKGDFGEWGIQGLPGNKGPRGDYLIGYPGR
EGAPGRDGRTAPHGRKGEKGVTGSLGSIGVQGAKGSIGFPGLRGRFGDQGRPGEPGQTGS
PGWAGIPGEQGDRGDIGFDGRNGDRGPRGALGNMGPKGQSGDVGPIGRPGAPGIPGQRGA
VGDRGIPGRIGPKGNAAYSGIKGEMGDSGIRGLPGNDGVPGAPGERGPVGDSPSALDGLP
GLKGDAGIPGRYGLNGLKGQKGAQGDFGLMGRAGEQGDRGDIGLAGYRGRNGLPGRKGVI
GEVGMTGFVGAKGESGDAGYFGLPGLVGDRGDVGEAGAIGIQGERGDEGYPGRPGVLLRG
FAERGDKGERGFQGAPGPIGAYGPDGAPGYPGPKGERGDIGISGAAGLDGYAGVKGEMGD
KGYPGVTGPIASFIERGDKGEPGYDGFPGRPGRLGPKGAPGEQGEYGENGLIGLPGISIV
GPKGQTGDAGYAGPPGRNGLNGRTGLKGERGDDGNQGERGEMGFAIRGRNGDVGDIGLLG
ASGLDGLKGEQGDQGYQGRPGPFGLQGPRGPQGDAGWSGVDGLNGLEGIKGEPGITYDFS
FARPGDRGERGLDGFKGQMGDIGEIGEAGSIGRRGLKGYQGDQGFMGSIGLDGPKGEQGM
IGLEGPPGLTGLPGPQGPVGAPAPPPPLPKSRGFVFTRHSQSVSIPECPINTHLLWEGYS
LAGNIGSSMAIGQDLGLSGSCMMRFTTMPYMFCDVNNVCNYAQNNDDSLWLSTAEPMPMN
MAPIQSFDLMKFISRCVVCETTTRIIALHSQSMSIPDCPNGWEEMWTGYSYLMTTTDNTG
GIGQSLVSPGSCLENFRTNPVIECHGHGRCNYYDPLASFWLAVIEEHEQWLQPRQQTLKA
DQTSKVSRCTVCRRKNESYLRRSSSVSATATEFRRGPESRIVEPSPIRYRPSPYRPVNRR
PVPGGRPSYYVGSTIDRNRASRIRRPREDTYAP
NT seq
5502 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgcccagaggccatctaggtctcttgggtggtggcgcccaacggcgattgacg
cacacttatgcgtggtcgctgatcttcgcaatgtacctgattgccttcgtggaaaatgac
tacagcttagccgatgcgagggaatccggaaaaaattgcaataatacggtgtgcgattgt
aagggtttgaagggacgtccaggtgctatcggtttgaagggctatcctggtattgagggt
ccacccggagatgttggtccaattggaccgtttggtcgacgtggtgaatatggtgatcca
ggcgaatatggtgaacaaggcgaaaaaggccatcgaggtgacatgggtgaattgggttta
cctggtcgacctgggataacgggtcctgctggcgaagacggtcctaagggcatttctgga
atcgatggttgtgatggtaaacctggtcagcagggtttacccggttcaccgggcctaaat
ggtcagcgtggttcaataggtaaacctggaccaccaggacctacaggtgatgctggtgaa
ggtggtatcaattcgaaaggtaccaaaggtaatcgaggtgtccaaggtcccgatggtgtt
gacggtcaacctggttatatcggcatgaaaggttacaaaggcgatattggctatcctggc
atagagggttcaaaaggtgaacagggctttaaaggttataagggtgatatggcagaaccc
gcgaatttactgcttttcggcgaaggtcagcttggcgaaaaaggtgaacctggagatggt
gaagaatctccactaattattggtgtagcaataaaaggttataagggtgaccaaggcttg
ttgggaatgacgggtattactggtgctacgggtgaaactggcgaattgggtaatgatggt
ttacctggccaaattggtgaaactggcgaaccgggtgaacgtggaaaacctggtaaagca
ggtgaacctggtattcctggtgagaaaggtgctaaaggtgccccaggctataacggtctc
gatggtgaagatggtttgaaaggagaagttggtgatgacggtttcgatggctttcccggt
gaacaaggtcccactggtccacccggtatttatgatcccaatttggataaatcttttcct
ggaccacaaggccctcaaggtgatatcggtccactgggtaatccaggccttccaggcata
cccggaaagcagggtcgccgcggtccatttggtcctgctggcccccccggcgatagaggt
ttagatggttcacctggtcgtcgtggtgtaagtgttataggagatgatggtgattacggt
tatatgggagcccctggacctatggggcctcctggaaatcctggccttccgggacgccct
ggtcaagtaggacaacccgggttaaacttgatgggccctaaaggtttcgctggaaggtta
ggtttacccgctccaaatggtttccgtggagatcgtggtgaagttggattacctggcgat
aaaggtgaaccaggtgatggtgtcaatattgttggtcctcctggcttcgaaggtccacct
ggtatacgtggcccaccgggtgtcgatggtaatcctggatggccaggtgagttcggtgct
aaaggtattcgtggtgacgattgcggtatatgtccagctggacccaaaggcacaaaaggt
atcccaggtgatacgggataccctggtgtacatggtgcacgtggtcctgtaggcttaaca
ggtgagcgtggtccgaaaggttggcctggtagtcctggaccaaaaggtcgaataggaatt
cccggtcttcctggagccagtggtggtatgggccgtcctggaattcctggccgtcctggt
tctcagtatccaattaataatatcgagaaaccagagagaggagatcttggagaagccggc
gaacgtggcgaacaaggtgaaaccggtgatatcggtttcaatggtagacctggtatacga
ggggccaaaggcgaaactggactacgaggagattacggtgatatgggtcgtccaggcaaa
gacggttttccaggaagaccgggtcgagatggtaaacgtggtcttgacgcatcaatgccc
aaattttatttgatcggtgaatctggacgggatggtcgcataggtgaacgaggcgaacca
ggcagtgagggaccaaaaggtgacaaaggtgaaccaaatcccggccaaatatacgataac
aaaggagaagttggtgatgttggtttaattggtttggttggtgataagggatttaagggc
ttaaaaggccaaaaaggaatatatggattaactggagacattggcttagctggccttaca
attcaaggtgaagtaggtgcaaaaggatggcctggatctactggagattacggatcacat
ggagttcctggaaatcctggtctgaatggtttacctggtctagatggcttagttggcctt
aaaggctatcgtggtgatcccggacgcagtgtattacctggagaaattggacccgatgga
aatccaggcattaaaggagaacagggagacattgggtggcctggtagtcctgggcccgct
ggtacaccaggtattaagggtgtaaaaggtgcgaaaggagatttcggcgaatggggcata
caaggtttgcctggtaataaaggccctcgtggtgactacctgattggttatcctggtcgc
gaaggagctccaggtagagatggaagaactgctcctcatggaaggaaaggtgaaaagggt
gtaacgggttcactgggatctataggagtacaaggtgctaaaggcagcattggattccca
ggactacgaggtcgctttggtgaccaaggaagacctggagaacctggacaaaccggcagc
ccaggttgggctggaatacctggtgaacaaggagatcgtggtgatatcggcttcgacggt
agaaatggtgatagaggaccacgtggtgcacttggaaacatggggccgaaaggtcaatct
ggtgatgttggcccaatcggacgccctggagctcctggaattccaggccaaagaggtgct
gtaggagatcgaggtatacccggacgtattggccctaagggtaatgcagcatacagtggc
attaaaggtgaaatgggcgattcaggtataagaggactacctggaaatgatggggttccc
ggtgctccgggagaacgaggtcccgttggcgactccccaagtgcattagatggtttgcca
ggattaaaaggagatgctggtattcctggacgttatggtttgaatggcttaaaagggcaa
aaaggtgcgcaaggagacttcggtttaatgggacgtgctggagagcagggtgatagagga
gatattggattagccggatatcgtggacgcaatgggctacctggaagaaaaggtgtaatt
ggagaagttggaatgactggtttcgtaggtgcaaaaggtgaatctggtgatgcaggttac
ttcggcttacctggtttggttggcgataggggtgatgttggtgaggccggagctatagga
attcaaggtgagcgaggagatgaaggctacccgggacgacctggtgtattgctacgtgga
ttcgcagaaagaggtgataagggtgaacgaggcttccaaggcgcgccaggacctattggt
gcatatggtcccgacggagcccctggttatccaggtccaaaaggtgaacgtggtgatatt
ggcataagtggagctgctggtttagatggatatgctggtgtcaaaggagaaatgggagat
aaaggttatcccggagtaactggtccaatcgcttcatttatcgaaagaggtgataaaggt
gagcccggctatgatggcttccctggacgcccaggacgtttgggtcctaaaggtgcacct
ggcgaacaaggcgaatatggtgaaaatggattaattggtttgccaggcatttctatagtt
ggaccgaaaggtcaaactggagacgctggttatgccggccccccaggtcgtaatggtttg
aatggtaggactggccttaaaggagaacggggtgatgatggcaatcaaggtgaacggggc
gaaatgggctttgctattcgtggcagaaacggtgacgtgggtgatatcggtctattagga
gcaagcggtttggatggacttaaaggtgagcaaggcgatcaaggatatcaaggacgtccc
ggaccatttggcttacaaggacctcgtgggccacaaggtgatgccggttggagtggtgtt
gatggcttgaatggtcttgagggtatcaaaggtgaaccaggaattacatatgattttagc
tttgcgcgtcctggtgatcgcggcgaacgtggacttgatggtttcaaaggccaaatgggt
gacatcggtgaaattggtgaagctggaagcataggtcgtcgtggccttaagggttatcaa
ggcgatcaaggattcatgggttctataggtcttgatggtccaaaaggtgagcaaggtatg
atcggtttggaaggtcctcctggtcttaccggactacctggccctcaaggacccgttggc
gcacctgccccaccaccaccattacctaagagtcgcggttttgtatttactcgtcactca
caatcagtatccataccagaatgcccgatcaatacacatttgttatgggaaggttactca
cttgctggaaatattggcagcagtatggccattggacaagatcttgggctatcaggttcc
tgtatgatgcgtttcacaacaatgccctatatgttctgtgatgtaaacaacgtatgcaat
tatgcgcaaaacaatgacgacagcttgtggctttccactgctgaaccaatgccaatgaac
atggcaccgatacaatctttcgatctgatgaaattcatatcacgttgtgtagtctgcgaa
acgacaacgcgaatcattgcactacacagtcagagcatgagcataccagactgcccgaat
ggctgggaagaaatgtggaccggttacagttatttgatgactacaactgataacactggt
ggaattggtcagagtttggtatcgcccggttcttgtctagaaaatttccgtaccaatccg
gttattgaatgtcatggacacggtcgctgcaactattatgatcctctcgcgtctttctgg
ttggcggtaattgaagaacacgaacagtggttacaaccaagacaacagaccttaaaagca
gaccaaacaagcaaagtaagccgttgtactgtttgccgtcgaaagaatgagtcttatctt
cgacgtagttcgtccgtgagcgctaccgcaactgagttccgtcgtggtccagagtcacgc
attgtagaaccatcgcccattcgttacaggccatcgccttaccgaccggtgaaccgacgt
ccggtaccaggcggtcgccccagctattatgtgggctcgacaatagatcgtaatcgcgca
agtcgcatacgacgtccccgagaagacacgtacgcgccgtaa
DBGET
integrated database retrieval system
