Bactrocera dorsalis (oriental fruit fly): 105223951
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Entry
105223951 CDS
T09719
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
bdr
Bactrocera dorsalis (oriental fruit fly)
Pathway
bdr03018
RNA degradation
bdr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bdr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105223951
09123 Folding, sorting and degradation
03018 RNA degradation
105223951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdr03019
]
105223951
03041 Spliceosome [BR:
bdr03041
]
105223951
Messenger RNA biogenesis [BR:
bdr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105223951
mRNA degradation factors
5'-3' decay
Lsm complex
105223951
Spliceosome [BR:
bdr03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
105223951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
DAHP_snth_FXD
Motif
Other DBs
NCBI-GeneID:
105223951
NCBI-ProteinID:
XP_011200169
UniProt:
A0A6I9UZB8
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All DBs
Position
5:24060631..24061136
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AA seq
96 aa
AA seq
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MASGLEAYINHTVSIITADGRNFIGTLKGFDQTINVILDESHERVFSTTSGIEQIVLGLH
IIRGDNIAVIGLIDDQIDSRLDLGNIRGEPLGPVVH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaggattggaggcctacataaatcataccgtgtctataattaccgccgatgga
cgaaactttatcggcacactaaaagggttcgatcaaactataaatgtcatcctcgacgag
tctcatgagcgagtcttctctaccacatctggtatcgaacaaattgttttgggactacat
attattcgtggtgataacatagctgtaattggtcttatagatgaccaaattgattcgcga
cttgacttgggtaacatacgaggggaaccattgggtccagtagtgcattaa
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