Bactrocera dorsalis (oriental fruit fly): 105224524
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Entry
105224524 CDS
T09719
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
bdr
Bactrocera dorsalis (oriental fruit fly)
Pathway
bdr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bdr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105224524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdr03041
]
105224524
03009 Ribosome biogenesis [BR:
bdr03009
]
105224524
Enzymes [BR:
bdr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105224524
Spliceosome [BR:
bdr03041
]
Complex A
U2 snRNP components
U2 related factors
105224524
Complex B
105224524
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
105224524
Ribosome biogenesis [BR:
bdr03009
]
Eukaryotic type
90S particles
Helicases
105224524
BRITE hierarchy
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
AAA_19
nSTAND3
SRP54
Flavi_DEAD
ABC_tran
ResIII
AAA_30
AAA_25
ATPase
T2SSE
PhoH
TsaE
AAA_7
HTH_IclR
Motif
Other DBs
NCBI-GeneID:
105224524
NCBI-ProteinID:
XP_011200932
EnsemblRapid:
LOC105224524
UniProt:
A0A034W103
LinkDB
All DBs
Position
3:complement(21914960..21919333)
Genome browser
AA seq
729 aa
AA seq
DB search
MSKRRIEVGETYNSKAKKDYDPSSTTFANASTVAPITGNVVGATRQPGAINPYNMKPYTQ
RYFNLYKKRITLPVFEYQADFMRLLNEHQCIVLVGETGSGKTTQIPQWCVEFAMTKGKKG
VACTQPRRVAAMSVAQRVSEEMDVGLGEEVGYSIRFEDCSSAKTVLKYMTDGMLLREAMS
DPMLEQYQVILLDEAHERTLATDILMGVLKEVIRQRSDLKLVVMSATLDAGKFQQYFDNA
PLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEDIEGDILMFLTGQEEIEEACK
RIKRETDNLGSDIGELKCIPLYSTLPPNLQQRIFEPAPPRNANGAIGRKVVVSTNIAETS
LTIDGVVFVIDPGFAKQKVYNPRIRVESLLISAISKASAQQRAGRAGRTRPGKCFRLYTE
KAYKNEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLA
ALDDDGNLTDLGAVMSEFPLDPQLAKMLIASCQHNCSNEILSITAMLSVPQCFVRPNEAK
KPADEAKMRFAHIDGDHLTLLNVYHAFKQSGEDPNWSYENFINFRSLKSADNVRQQLARI
MDRFNLKRSSTEFTSKDYYVNIRKALVQGFFMQVAHLERTGHYLTIKDNQNVQLHPSTCL
DHKPDWVIYNEFVLTTKNYIRTVTDIKPEWLLTLAPQYYEMTNFPQCEAKRQLEMLQQRL
ESKQFQKGF
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaggcgtatagaagtcggtgaaacctacaattcgaaggcgaaaaaggattat
gatccgtcctcgacaacgtttgctaatgcttctacagttgctcccattaccggcaatgta
gttggtgccacgcgccagccgggcgctataaatccctacaatatgaaaccttacacacag
cgctactttaacctttataaaaagcgaattacgctaccagtttttgagtatcaagctgac
ttcatgcgtttattgaacgaacatcaatgtatagttttagtgggagaaactggttctggt
aaaactacacaaatcccacaatggtgcgtagagtttgctatgacaaaaggtaaaaagggt
gttgcttgtacacaaccacgtcgtgtggcagcaatgtctgtggcacagcgtgtttcggaa
gaaatggatgtaggacttggcgaagaagtgggatattctattcgttttgaggactgctca
tctgccaaaaccgtactcaaatacatgactgacggtatgttgttgcgtgaagctatgtct
gatcccatgttggaacaatatcaggttatattgttggatgaggctcacgaacgtacattg
gcaacagatattttgatgggtgtactgaaagaagttataaggcaaagaagtgatttaaaa
ttagtagtgatgtccgccactttagatgccggcaaatttcaacagtatttcgacaatgca
cccttaatgaacgtaccgggtcgtacacatccagtagaaattttctatacacccgaaccc
gaacgtgattatttagaagcagcaatacgtacagtaatacaaatacatatgtgtgaagat
attgaaggtgatatattgatgtttttaactggtcaggaagaaatagaagaagcatgcaaa
cgcattaaacgtgaaactgacaacttgggttcagatattggcgaacttaaatgcatacca
ctttactcaactttgccgccaaatttacaacaacgtatttttgagcctgccccaccgcgc
aatgctaacggggccatcggacgtaaagttgttgtatccaccaatattgctgaaacatcg
ctaaccattgatggtgttgttttcgtgattgatccaggatttgcgaaacagaaagtctac
aacccacgtatacgtgtagagagtttacttatttccgctatatccaaagcttcggcacaa
caacgtgctggtcgtgctgggcgaacacggccaggaaaatgctttcgattatacactgaa
aaagcttataaaaacgaaatgcaggataatacctacccggaaatattgcgttcaaattta
ggtactgttgttttgcaattgaagaagcttggtattgatgatttggtgcacttcgatttt
atggatccacctgcaccagaaacacttatgcgtgctctggaattgcttaattacttagca
gctttggatgatgatggcaatcttaccgatttgggtgccgtcatgtctgaatttccattg
gatccacagttggcaaaaatgttaatagccagctgtcaacataattgctcgaatgagata
ctctcaataacggcaatgctgtcggtgccacaatgctttgtgcgaccgaatgaggctaag
aaacctgccgacgaagcaaagatgcgtttcgctcatatcgatggtgatcacttaacatta
ttgaatgtctatcatgcttttaaacagagtggtgaagaccccaattggtcttatgagaat
tttataaatttccgttcattgaaatcagccgataatgtgcgtcaacaactcgcacgtata
atggatcgtttcaatttgaaacgcagcagcacagaatttacatccaaagactattatgtc
aacatacgcaaagcgttggtgcagggctttttcatgcaggtcgctcatttggaacgtacc
ggccactatttgaccattaaagacaatcaaaatgtgcagttacatccgtctacatgttta
gatcataaacccgattgggtaatctataatgaattcgtattgacgacgaagaattatata
cgcacagttacggatattaagccggaatggctgctcactttagcgccacaatactacgaa
atgacaaactttccacaatgcgaagcaaaaagacaactggaaatgctgcagcagcgcctc
gagtcgaagcagtttcaaaagggattttaa
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integrated database retrieval system
