Bactrocera dorsalis (oriental fruit fly): 105225073
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Entry
105225073 CDS
T09719
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
bdr
Bactrocera dorsalis (oriental fruit fly)
Pathway
bdr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bdr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105225073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdr03041
]
105225073
Enzymes [BR:
bdr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105225073
Spliceosome [BR:
bdr03041
]
Complex C
Other components
Step II factors
105225073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
S1
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
Flavi_DEAD
nSTAND3
AAA_30
HTH_70
AAA_16
Motif
Other DBs
NCBI-GeneID:
105225073
NCBI-ProteinID:
XP_011201703
UniProt:
A0A034VE32
LinkDB
All DBs
Position
3:complement(13512558..13517027)
Genome browser
AA seq
1373 aa
AA seq
DB search
MEELRRLEYLSLVSKICTELENHLGLNDKDLAEFIIDLEHKNPTFDSFRKALHENGAEFP
DSFVTNLQRIINLMKPGRDTEELEGGGSFKTAKADQLTRMFPGLALPNDKFSKTYSSGGE
SANDSASSGSDSESEKDNNKNKGSKSQKDDDLDDVMDELEALAPSKRKQNKKNDIDDTMA
ELEALAPSQRKNEDKINKDDVDDMMAELEALAPSKRRKSDEKPSKRDIEDAIDKLEALAP
SAHKKYEDVKVKSEKKKKLDRHSRSRSRSKEHISRHERSSRRDRSRDRRSRSYSPSERRK
NDKRRRSRSKSRDRGRMHERDRERERENYRSERRRRSRSRSHGHSTSSSSRRRSRSHDRH
RRSRSRERNERSDRRRSRSRDRNERSRRKRSRSNSEERHGRNEKMPPPATLPDDPEAGKI
YAGKVANIVPFGCFVQLFGLRKRWEGLVHISQLRSEGRVTDVTEVVQRNANVKVKVMSIA
GQKVSLSMKEVDQATGRDLNPLSHVAPEDEMRDRNPDRPYSGTSLLNLQGGSMDNDESDS
RKRVTRISSPERWEIKQMISSGVIDRSEMPDFDEETGLIQKEEDDEADIEIEIVEEEPPF
LSGHGRALHDLSPVRIVKNPDGSLAQAAMMQSALSKERREQKMLQREQDAVAPTNMSRNW
IDPLPDEDESRAMTNTRGIGSGATIEVPEWKKHVIGGKKSSFGKKTDMSLLEQRQSLPIY
KLRDDLIKAVSDNQILIVIGETGSGKTTQITQYLAESGFTARGKIGCTQPRRVAAMSVAK
RVAEEFGCRLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLMEADLKSYSVIMLDEAH
ERTIHTDVLFGLLKGAVQKRPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEVLY
TKEPETDYLDASLITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELI
ILPVYSALPSEMQTRIFDPAPAGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSK
TGMDSLVVTPISQAAAKQRAGRAGRTGPGKCYRLYTERAYRDEMLPTPVPEIQRTNLAMT
VLQLKTMGINDLLHFDFMDAPPVESLVMALENLHSLSALDDEGLLTRLGRRMAEFPLEPN
LSKMLIMSVALQCSDEVLTIVSMLSVQNVFYRPKDKQALADQKKAKFNQPEGDHLTLLAV
YNSWKNNKFSNAWCYENFVQIRTLKRSQDVRKQLLGIMDRHKLDVVSAGKNSVRIQKAIC
SGFFRNASKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVVYHELVQTTKEYMREVTTI
DPKWLVEFAPSFFRFSDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVRRRRN
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atggaggagttacggcgattggaatacttgtcgttggtctcaaaaatttgcaccgagctg
gaaaatcacttggggctaaatgacaaagatttggcggagtttataatcgatttggagcat
aaaaatcctacattcgattcatttcgcaaagcactgcatgaaaatggtgccgaatttcca
gattcatttgtgacgaatctccagcgcattatcaatttaatgaagccgggaagagacact
gaagaattagaaggcggtggcagctttaaaactgcaaaagcagatcaattgacgcgtatg
tttcccggcttggcattgccaaatgataagtttagtaaaacgtatagcagtggtggagaa
agtgctaacgatagtgcgtctagcggatccgactcagaaagtgagaaagataacaataag
aacaaagggagcaagtcccaaaaagatgatgacttagacgacgttatggatgagctagaa
gcacttgcaccaagtaaacgtaagcaaaataaaaaaaatgatatcgacgacacaatggca
gaattggaggcactggcaccaagtcaacgcaaaaatgaggataaaataaataaagacgat
gtcgatgacatgatggcagagttagaagcgttagctcctagtaaacgtagaaaaagtgac
gaaaagcctagtaagagggatattgaagacgctatagacaaattggaagcactagcacca
agtgcacataagaaatatgaagatgttaaagtaaaatcagaaaagaagaaaaagcttgat
cgtcattcccgttctcgttcacgatcaaaagaacacattagccgacatgaacgcagtagt
cgtcgcgacagaagccgagataggcgatcacgttcatattcaccaagtgagcggcgtaaa
aatgacaaacgtcgacgttcccgcagtaaatcgcgtgatcgtggacggatgcatgaacgg
gacagagaacgtgaacgtgaaaactaccgtagtgaacgtagacgtcgttcacgctcacgt
tcgcatggtcatagcactagtagcagtagcaggcgtcgatcacgttcgcacgatcgtcac
cggcgctcaaggtcccgtgagcgcaatgagcgtagcgacagaagaaggtcccgttctaga
gaccgtaatgaacgtagcagacgtaagcgttcacgttccaactccgaggaacgtcatgga
cgaaatgagaaaatgccaccaccagcaacacttcctgatgatccagaggcgggcaaaatt
tatgccggcaaagtagcgaatattgtaccgttcggctgttttgtgcagctttttggtttg
cgtaaacgttgggagggattggtgcatatatcacaacttcgttccgagggtcgtgtaacg
gatgtaacggaagtcgtgcagcgcaatgcaaatgtgaaagtgaaggtgatgtctatcgca
ggacagaaggtatcgctttctatgaaagaggtagatcaagcgactggtagggatttgaat
ccgttatcgcatgtagcgccggaagatgagatgagggatcgtaatcctgacaggccgtac
agcggtacttcgttgctaaatttacaaggcggtagcatggacaacgatgaaagtgattcg
cgtaaacgcgtcacgcgcatatccagtcctgaacgttgggaaattaaacagatgatcagc
tccggtgtcattgatcgcagtgaaatgcctgattttgacgaggaaactggtctcatacaa
aaggaggaggacgacgaggctgacattgaaatagaaattgtggaagaggaaccaccattc
ctttccggccatggacgcgcattgcacgatctctcacccgtgcgcattgttaagaatccc
gatggttcactggcacaagctgccatgatgcagtccgcattatcaaaggaacgtcgagaa
cagaaaatgttacaacgcgagcaagacgccgtcgctccaaccaacatgagtcgcaactgg
attgatcccctgcccgatgaagatgagtctcgcgctatgacaaatacacgcggcattggt
tccggcgccaccatcgaagtgcccgagtggaaaaaacacgttattggcggcaaaaaatcg
tcctttggtaaaaagacagacatgtccttgctggaacaacgtcaatcgctacccatttac
aagctgcgcgatgacctcatcaaagctgtctccgataatcagatactgattgtcatcggc
gagacaggctccggcaagacgacacaaattacgcagtacttggcagaaagtggcttcaca
gctcgtggcaaaattggttgcacccagccgcgtcgtgtggcggccatgtctgtggcaaaa
cgtgtggcagaagagttcggttgccgtctcgggcaagaagtgggctacactatacgtttc
gaggattgcactagtcccgaaacggtgatcaaatacatgacagacggtatgttattgcgc
gaatgtctgatggaggctgatttgaaatcctattccgttatcatgttggatgaagcgcac
gaacgtacaatacacactgacgtactcttcggtctcttaaaaggtgccgtccagaagcga
cccgaactcaagctgatcgtcacttccgctacgctagatgctgtaaaattctcgcagtac
ttctttgaagcgcctattttcactataccgggtcgtacattccccgtggaagtgttgtac
accaaagaaccggaaactgactatttggacgcttcactgataacggtaatgcaaatacat
ttgcgcgaaccaccaggcgacatattgctcttcctaacgggtcaggaggagattgacacc
gcttgcgaaatactttacgaacgcatgaaaagtttgggacccgatgtgcccgaattgatc
atactgcccgtgtattcagcgttgccatccgaaatgcaaacgcgtattttcgacccggca
ccagcgggcagtcgcaaagtcgtcattgccacaaatattgcggaaacctcactaacaatt
gatggcatcttctatgtggtcgatccgggttttgtcaaacaaaaggtatacaactcgaaa
acgggcatggactcgctggtggtcacaccgatttcgcaagcggcagccaaacagcgcgcc
ggtcgtgctggacgcacaggtcctggcaaatgttatcgcttatacacagagcgcgcatat
cgtgacgaaatgttgcccacgccagtaccagaaatacagcgcacgaatttggccatgacc
gtgttgcaactgaagacaatgggtattaatgatctgctacatttcgatttcatggacgca
ccaccagtcgaatcgttagttatggctttagaaaacttacattcattatccgcgctggac
gatgaaggtttgctgacacgtttgggccgacgtatggccgaattcccattggaaccaaat
ctatcgaaaatgctcattatgtcggtggcattgcaatgctccgatgaagtgctcacaatc
gtgtccatgttgagtgtacagaatgtgttctatcgtccgaaagacaagcaagccttggcc
gatcaaaagaaggcgaaattcaatcaacccgaaggcgatcatctaacgctacttgcggtc
tacaacagttggaaaaataataaattctcaaatgcttggtgttacgaaaatttcgtacaa
atacgtacgctcaaacggtcgcaagatgtgcgcaaacaattgctcggcataatggatcgt
cataaactggatgttgtttcggcaggcaaaaattctgtgcgcatacaaaaagccatctgc
tcgggtttcttccgtaatgcatccaaaaaggatccacaagaaggttatcgtactctagtg
gattcacaggttgtctacatacatccctcaagcgcgctattcaatcgccagcccgagtgg
gtcgtttaccacgagctcgtgcaaaccaccaaagaatatatgcgcgaagtaacgaccatc
gatccgaaatggttggtggaatttgcaccatcatttttccgcttctccgatccaacgaag
ttgagtaaattcaagaagaaccaacgtctcgagccattgtacaataaatacgaagagccc
aatgcttggcgtatatcacgcgtacggcggagacgtaactaa
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