Bactrocera dorsalis (oriental fruit fly): 105226174
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Entry
105226174 CDS
T09719
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
bdr
Bactrocera dorsalis (oriental fruit fly)
Pathway
bdr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bdr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105226174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdr03019
]
105226174
Messenger RNA biogenesis [BR:
bdr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
105226174
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
105226174
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GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
ECR1_N_2
EXOSC1
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
105226174
NCBI-ProteinID:
XP_019845801
UniProt:
A0A6J0RKM9
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Position
4:complement(1720223..1725814)
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AA seq
298 aa
AA seq
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MTTNVNIRLAIDRVNMGLLAQNQTRAPRLYTPGEVVTGQFGFMKGHGTYVEGEDIKASVA
GVMEQVNKLISIKPLKSRYVGEIGDVVVARITEVQQRRWKVDTNSRLDSVLLLSSVNLPG
GELRRRGVEDEQMMRKYLQEGDLISAEVQNIFDEGTLSLYTRSLKYGKLSQGVLVKVFPS
LVKRRKTHFHNLTCGASIILGNNGFIWISPTVNNEADGGDGGYAQNLNEVIPRADREVIA
RLRNCILALAHCKMMLYDTSILYAYEESMKYEVHELLQQEAIFDVAFLTQHRLRLQEE
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgactacaaacgttaatatacggctagctattgatcgtgtcaatatgggtttgttggca
caaaaccaaacaagggcaccacgcctttacacacccggcgaagtggtcactggtcagttt
ggcttcatgaagggccatggcacttatgttgaaggtgaagatattaaagcatccgtagct
ggagtgatggaacaggtgaacaagctaatttctataaaaccacttaagagccgatatgta
ggtgaaataggagatgttgtggttgcacgcattactgaagtacaacaacgacgttggaaa
gtggatacgaactcacgtttggattccgtattgttattgtcttctgtaaatttaccgggc
ggcgaattgcgacgaagaggtgtggaagatgaacaaatgatgcgtaaatatctacaagag
ggtgatcttatatcggctgaagtgcagaatatttttgatgaaggcacattatcactttac
acacggagtttgaaatatggcaaattatcacaaggagtacttgttaaagtctttccgtca
ctggttaagcgacgtaagacgcattttcataacttgacatgtggtgcatctataattctt
ggaaacaatggctttatatggatatcgccaactgtgaataacgaagctgatggcggtgat
ggtggctatgcgcagaatttgaatgaagtaataccacgagcagaccgagaggtaattgca
cgtttgcggaattgcattctagctttagcgcattgcaaaatgatgctttatgacacaagc
atcctgtacgcatatgaggagtccatgaagtacgaagtgcatgaattgctgcagcaagag
gctatatttgatgtggcctttctaacacaacatcgtttacgattacaagaagaataa
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