Bactrocera dorsalis (oriental fruit fly): 105226244
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Entry
105226244 CDS
T09719
Name
(RefSeq) maternal effect protein staufen
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
bdr
Bactrocera dorsalis (oriental fruit fly)
Brite
KEGG Orthology (KO) [BR:
bdr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bdr01009
]
105226244
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdr03019
]
105226244
Protein phosphatases and associated proteins [BR:
bdr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105226244
Messenger RNA biogenesis [BR:
bdr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
105226244
mRNA cycle factors
Stress granule specific factors
105226244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
Dicer_dsRBD
Aida_N
Motif
Other DBs
NCBI-GeneID:
105226244
NCBI-ProteinID:
XP_019845823
UniProt:
A0A6J0RH14
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All DBs
Position
3:complement(83248006..83262337)
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AA seq
1240 aa
AA seq
DB search
MQHHAHVARTAPPHLRAHHMAVPPPHTQSQPHIPQMNLAHVPPPPPNGQQQQQTSQQKQS
QHLSNGPATAGTAAVISGSSIAVASHVRDHHTARLNQQPLQQQQHQHPSSMHTSTQLQKL
RQQHQHINNNNNNSTNKNNYHHHQAQQQYNNSTSNTHGNVLPVQAAIQQQQQSKQSTQVP
HHTSRHHQQQQQQHQLHHQQQPQQQATQQLQHKHTVAPMPPQQSHGHVKHQQPLQQTQPQ
QQQAVQTTTNLVIAKNVINTHVPPPSLPQTQHLQQPSPTTLNYYTAGNTQSNNNNVHKSK
YNNNNSIVAVSGGGAGSGMPPKTILQNPNRVLKARLHASSATNNIDVSTVRPSVGVDETN
KVAKNVGTNVVSSTETHLSEVVANNVTTTAAESTTRHESLQIVQSTNQAEAASIESNKEN
MTSAVQSSNSTIEVSSSTTNNNHILSNEDNTVAKNSKEKTPMCLVNELARYNKITHQYRL
TSEKGPAHCKRFTVTLKLGEEEYSAEGFKIKKAQHLAAAEAIEKTKYKHPVPKVIRRGAD
GEGSSSRANITPTVELNALAMKLGQQTYYLLDPRQVGPNDGMGPPPDAMMAPRFNVPPPP
HALPPHAMAGGHMLPQHPPPHVRLMDPAYVRRNGPYAPAPPQPQMHGLPAAGSVMRPRYG
APAQRAYMPKYNQQQRYPLMAPPPMAGGPHNGMLPPPPLPHQQHPHHGGMPHRYGMPAAL
TKVTLVVGKQKFVGLGRTLQQAKHDAAARALQVLKAQAATQLNEELNNSLEESDNKSPIS
LVYEIGIQRSLTVHFKVLREEGPAHMKKFVTACVVGTIVTEGEGNGKKISKKRAAEKMLE
ELRKLPPLTPTKSPIKRIKVKTPSKAAAGADAVSGGGGKSGGSMGERRKRGSSSIKEKND
ADTETENPITRLIQLQQNRKEKEPVFELIAKNGNENSRRREFIIEVTAHGMVARGTGNSK
KLAKRNAAQNLLLAMGEKDTAAAELKSNTALVYTQSVVCAESVVTTSVPASKEQTNTVLQ
PNVEATAVPAINAAPAVAAEAHIDVPLVTTTAGQVPGILILRHNKKHATKKKESMINTTT
RLPVVEEIENKQEESVISTTQTAPAAVQNNASSTDNQSSAAASTKPIVEATATPAVADST
NTASSTSGSAAPTSSASKPKPAGVHTKDQLLYLAKLLGFEVNFSDFPKGNHSEFLTIVTL
SSNPPQICHGMGTSAEESQNDAAKNALKLLSKLGLNNATN
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgcagcatcatgcacatgtggcacgtacagcacctccccacttgcgtgcccaccatatg
gctgtgccaccaccgcatacccaatcacagcctcatataccgcaaatgaatttggcacat
gtgccaccgccgccaccaaacggacaacagcaacagcagacgagtcagcaaaagcagtca
caacatcttagtaatggtcctgcaactgctggtactgctgcagtgatctcaggctcgtcc
atcgccgtggcgtcacatgtgcgcgatcatcatacagcacgtttgaatcagcaaccattg
caacaacaacaacatcagcatccctcatctatgcacaccagcacgcagctgcaaaagctg
cgacaacaacatcagcacataaacaacaacaataataatagtacaaacaagaacaactat
catcatcatcaagcgcagcagcaatacaacaatagcacgagcaatacgcacggcaatgtg
ttgccggtacaagcagcaatacaacaacagcaacaatcgaagcaaagcacacaggtgcca
catcatacgtcgcgacatcaccagcagcagcagcagcagcatcagttacatcatcaacaa
caaccacaacaacaagcaacgcagcagctgcaacataagcatacagtggctccaatgcca
ccacagcagtcacacgggcacgtaaagcaccaacagccgttgcagcaaacacaaccacaa
caacaacaagcggtgcaaacaaccacaaatctggttattgcaaagaatgtcatcaataca
catgtgccaccaccgtcgctgccacagacacaacatctgcaacaaccatcacctacgact
ttgaactactacactgccggtaacacgcaaagcaacaacaataatgtgcataaatctaag
tacaacaataataatagcattgtggcggtcagtggtggaggtgctggcagtggcatgcca
ccaaaaaccatattgcagaatccaaatcgcgtgctaaaagcgcgcctgcatgccagctcg
gctacaaataatattgacgtgagtactgtgagaccgtcggtgggtgtagatgaaactaat
aaagtagctaagaacgttggcaccaatgttgttagctccacagagacacatctaagtgag
gtcgttgctaataacgtgaccacaacagcagccgaaagcactacgaggcatgagagttta
caaatcgtccaaagcactaaccaagcagaggctgcctccattgagtctaataaggagaat
atgactagcgcagtacaaagctccaattccaccattgaagttagcagcagcacgacaaac
aacaaccacatattgtccaatgaagacaacacagtggcgaaaaattcgaaagaaaagaca
ccgatgtgtttggtcaacgaattggcgcgttacaataaaatcacacatcaatatcgctta
accagcgagaaggggccagcgcattgcaagcgtttcacggtcacgctgaaacttggtgag
gaggagtattcggctgagggtttcaaaataaagaaagcccaacacttggcagctgctgag
gctatcgaaaagactaaatacaaacatcccgtgccgaaagtgatacgccgcggcgcggat
ggtgaggggagttcatcgcgtgccaacatcacgcctacagtcgagttaaatgcgctcgct
atgaaattgggtcaacagacctactatctgctcgatccacgacaagttggaccgaacgat
ggcatgggaccaccaccagacgctatgatggcaccacgtttcaatgtgccaccgccacca
catgcgctgccaccacacgccatggccggtggtcatatgctaccgcagcacccaccacca
catgtgcgtttaatggatccggcatatgtgcgccgcaacggcccgtatgccccagcgcca
ccacaacctcagatgcacggacttcccgctgccggctcggttatgcgtccacgttatggt
gcgcccgcacaacgtgcgtacatgcccaaatataaccaacagcaacgttacccgttaatg
gcgccaccacctatggccggcggtccacataacggtatgctgccaccgccacctttgcca
caccaacagcacccacaccacggtggtatgccacatcgttatggcatgcctgctgctttg
accaaggtgacactagtcgtgggaaagcagaaatttgtagggctgggccgtacattgcaa
caagccaagcacgatgccgcagcgcgtgccttgcaagtgctcaaggcgcaagccgccaca
cagctcaatgaagagctcaacaacagtttggaggagagcgacaacaaatcaccaatctcg
ctggtttatgagatcggcatacaacgcagcctaacggtacactttaaggtgctgcgcgaa
gagggtccagcgcacatgaaaaaattcgtaacagcttgcgtagtgggcaccatagtaact
gaaggtgagggtaacggcaagaagatatcaaagaaacgcgctgcggagaagatgctggag
gagctaaggaaactaccaccattaacgcccaccaagtcacccataaaacgtatcaaagtg
aaaacaccaagcaaagcggcagccggcgctgacgccgtttcgggcggtggtggcaaatcg
ggtggcagtatgggtgagcgacgaaaacgtggcagtagttcgatcaaggagaagaatgat
gctgataccgagactgagaaccccatcacgcggctcatacagttgcagcaaaatcgcaag
gagaaagagccggttttcgagttgatagcgaagaatggcaatgaaaactcgcgtagacgc
gaattcattatcgaggtgacggcacacggcatggtagcacgtggcaccggcaacagcaag
aagctggccaaacgcaatgcagcacaaaatctgctcttggcaatgggcgaaaaagacacc
gcggctgctgaactgaagtccaacacagcgctagtttacacacagtctgtagtttgtgcg
gaatcagtagtaacaacaagcgtaccggccagtaaagagcaaaccaatacagtattgcag
ccaaatgttgaagcaactgcagtgccagcaatcaacgcagcgccagctgttgccgctgaa
gcgcacattgatgtgccacttgtaaccaccacagctgggcaagtacccggcatactaata
ctgcgtcacaacaagaaacatgcaacaaagaaaaaagaaagcatgattaatactacaaca
cgtctaccggtggttgaggaaattgaaaacaagcaggaggaatcggtaatctctacaacg
caaacggcacctgccgcggtacaaaacaacgcaagcagcactgacaatcaatcgtcagct
gctgcaagtactaaacccattgttgaagctactgccacaccggctgtggcggactctaca
aataccgctagcagcaccagtggcagtgccgcgccaaccagcagtgcgtcgaagccgaaa
ccggcaggcgtgcacacgaaagatcagttgctatatctagcaaaattgctgggttttgag
gtgaacttttccgattttcccaagggaaatcacagcgaattcctaacgatcgtaacgctt
tcttccaatccaccgcaaatctgtcatggcatgggcactagcgctgaggaatctcaaaac
gatgcggctaaaaatgcgttaaaactgcttagtaaattaggcttgaataatgcgacgaat
taa
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