Bactrocera dorsalis (oriental fruit fly): 105226579
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Entry
105226579 CDS
T09719
Name
(RefSeq) probable cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
bdr
Bactrocera dorsalis (oriental fruit fly)
Pathway
bdr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bdr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105226579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdr03019
]
105226579
Messenger RNA biogenesis [BR:
bdr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
105226579
U7-dependent histone pre-mRNA processing factors
105226579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
105226579
NCBI-ProteinID:
XP_011203816
UniProt:
A0A6I9V417
LinkDB
All DBs
Position
Unknown
AA seq
745 aa
AA seq
DB search
MTSIIKLHTISGAMDETPPCYILQIDEVRILLDCGWDEKFDPNLIKELKRHVHTIDAVLL
SHPDVYHLGALPYLVGKLGMNCPIYATIPVYKMGQMFMYDLYMSHYNMYDFDLFSLDDVD
AAFDKIIQLKYNQTVSLKGKGYGITVTPLPAGHMIGGTIWKILKVGEEDIVYATDFNHKK
ERHLNGCELERLQRPSLLITDAFNAQYQQARRRARDEKLMTNILQTVRNNGNVLIAVDTA
GRVLELAHMLDQLWKNKESGLMAYSLAMLNNVSYNVIEFAKSQIEWMSDKLMKSFEGARN
NPFQFRHMQLCHNLAELAKMSSPKVVLASTPDLESGFTRELFVQWAANPSNSIIITSRTS
QGTLAMDLVDNASPGRKLELDVRRRVELEGAELEEYLRTQGEKLNRLIVKQDIEEESSSD
SDDDIEMSVITGKHDIVVRPEGRHHSGFFKSNKKHYAMFPFHEEKIKCDEYGEIINLDDY
RISELGFETAIDENKENIKKEEPKESKTNTNDVQLLEKPTKCTSQRKTIEINAQIQRIDF
EGRSDGESMLKILSQLRPRRVIVVHGSEEATSVVAKHCQQNIGARVFTPQKGETIDATTE
SHIYQVRLTEGLVAQLQFQKGKDAEVAWVDARIGVRTQAIDSRATDDGDMEVEVSEDKTL
TLETLETDDIPVHNAVLINELKLSDFKQVLMRNNISSEFSGGVLWCANGTLALRRMDAGK
VTMEGCVSEEYYKIRELLYEQYAIV
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgacttctataataaaacttcatacaatatccggggctatggatgaaacaccaccctgt
tatattttgcaaatcgacgaagtgcgaatactgcttgattgcggttgggacgaaaaattc
gatcccaaccttataaaggaattaaaaaggcatgtgcatactatcgacgctgtgctacta
tcccatcctgacgtttatcacttgggtgcgttgccctacctggtcggcaaacttggcatg
aattgtccgatctatgcaacaatacctgtttataaaatgggacaaatgtttatgtacgat
ttatatatgtcgcattataatatgtacgattttgatttattttcacttgacgatgtggac
gccgcattcgataaaatcattcaacttaagtacaatcaaacagtttcacttaaaggtaaa
ggttatggtattactgtaacgccacttcccgcagggcatatgataggtggcactatctgg
aaaatccttaaagtgggtgaagaagacattgtatatgccacagatttcaatcataaaaaa
gagcgtcacctaaatggttgtgaactagaacgcctccagcggccttcactacttataaca
gacgcttttaacgcacaatatcaacaggcacgtcgtcgtgcgcgcgatgaaaaacttatg
acaaatattctacaaacggtgcgcaacaatggtaatgttttgattgcagtggatacagca
gggcgtgtgctggagttggcgcatatgcttgatcaactgtggaaaaataaagaatctggt
ctgatggcttactcattggctatgttgaataacgtcagttacaatgtaattgaatttgca
aaatcccaaattgaatggatgagcgacaagctgatgaaatcatttgagggtgcgcgaaat
aacccttttcaattccgtcacatgcaactgtgccataatttagctgagctggcaaagatg
tccagcccaaaagttgtgctggccagcactcccgatttggaaagtggattcacacgcgaa
ttattcgtgcaatgggcagcaaatccttcgaacagtataattattacatccaggacatcg
caaggtacattagcaatggacttggtagacaatgcttcaccgggcagaaaactggaactg
gatgtgcgtcgacgtgtagaactggagggtgctgagttggaagaatacctgcgcacacaa
ggtgaaaagctaaaccgtttgattgttaagcaggatatagaagaagaaagcagctcggat
tcggatgatgacatcgagatgagcgttattaccggcaaacatgacatagttgtgcgtccg
gaaggccgtcatcacagtggtttcttcaaatcgaacaaaaagcactatgccatgtttccc
ttccatgaagaaaagatcaagtgtgacgaatatggtgaaattatcaatttagacgattac
cgcatttcggaattgggatttgaaactgcgatcgatgaaaataaggaaaatatcaaaaag
gaagaaccgaaggagagtaaaacgaacacaaatgatgttcaattgttggagaaacccacc
aaatgcaccagtcagcggaaaacaattgaaattaatgcacaaattcagcgaatcgacttt
gaaggacgttcggatggtgaatcgatgcttaagatattgtcgcaattgcgtcccagacgt
gtcattgtagtacacggctcagaggaggccaccagtgttgttgccaaacactgccaacaa
aatattggagcaagagtttttacaccacaaaagggtgaaaccattgatgccacaaccgag
tcgcatatttaccaggtgcgtttgacggaaggtcttgtggcgcagctgcaattccaaaag
ggtaaagatgctgaggtggcctgggtggatgctcgtattggagtgcgtacgcaagctata
gattcgagagcaacggacgacggcgacatggaagtcgaggtatcggaggacaagactctc
acacttgaaacgctcgaaaccgacgacatacctgtacacaatgctgtgttaattaacgaa
ctcaaactatcagacttcaagcaagtgctgatgcgcaacaatatcagttcagagttttcc
ggaggtgtattatggtgtgcaaatggcacgctggctctgcggcgcatggatgcgggtaaa
gtgactatggagggttgcgtatcagaggagtactataaaattagagaactgctttatgag
caatacgccattgtatag
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