Bactrocera dorsalis (oriental fruit fly): 105226945
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Entry
105226945 CDS
T09719
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
bdr
Bactrocera dorsalis (oriental fruit fly)
Pathway
bdr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bdr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105226945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdr03041
]
105226945
Enzymes [BR:
bdr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105226945
Spliceosome [BR:
bdr03041
]
Complex C
Other components
Step II factors
105226945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
AAA_19
nSTAND3
T2SSE
AAA_7
AAA_16
ABC_tran
Sigma54_activat
ATPase
AAA_23
Motif
Other DBs
NCBI-GeneID:
105226945
NCBI-ProteinID:
XP_049312257
LinkDB
All DBs
Position
4:complement(63615755..63660648)
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AA seq
1257 aa
AA seq
DB search
MEDDDVGVHRLEGSTGNVRGGLVIKKTKEEGGGSKFKMPKPSILGLDRLAAQRRKEREEA
QRLISFKDNENDEDDHKGGVSATSAGDEFAFKKPDTNKITRQLRESRVETPSHTGGVSEE
ARERLREHVKRDRERTTKGGMRYSTREDSKRDNRDRSSSSSSSRDRDRDRDRRRERDRPR
DYERDRNRGRYQDKDRNRDKERRDRSRENSERGNRGDATSVRSGERTPRFKDEPRTPMDI
SLNGSAWDDDDNDRPSQTKKSSWDFPTPKSYASSERSDWSVRSSSSSGIGTSSSRGRSRQ
EREDDTPRPTPAHNYNVWANDRKRSGATPATGRSNRQPWGESEEDRDMWEEEQRRLDREW
YNIDEGYDDENNPFSGANADYFRKREEIIEQKRTKRISAQQRQINKDNELWERNRMLTSG
VVMSINVNEDFDEEALERVHLLVHHIIPPFLDGRIVFTKQPEPVIPVKDPTSDMALIARK
GSSLVRVYREQKERRKAQKKHWELGGTKLGNIMGIEKKVDEEDAKFDKDTDTADYRRDQK
FAEHMREQDSGGKSDFARKKTIAEQRRFLPVFAVRQELLNVIRENSVVIIVGETGSGKTT
QLTQYLHEDGYSNFGMIGCTQPRRVAAMSVAKRVSDEMGTKLGDEVGYAIRFEDCTSEKT
VIKYMTDGILLRESLRDPDLDGYSAIIMDEAHERSLSTDVLFGLLREIVARRHDLKLIVT
SATMDSTKFATFFGNVPNFTIPGRTFPVDVMFSKNTCEDYVESAVKQALQVHLTPNEGDM
LLFMPGQEDIEVTCEVLAERLAEIDNAPELSILPIYSQLPSDLQAKIFQKSPEGLRKCVV
ATNIAETSLTVDGIIYVIDSGYCKLKVYNPRIGMDALQIYPISQANANQRSGRAGRTGPG
QAFRLYTQRQYKEDLLPLTVPEIQRTNLANTVLLLKSLGVVDLLQFHFMDPPPQDNILNS
LYQLWILGALDHTGALTPLGRQMAEFPLDPPQCQMLIVSCKMECSAEVLIIVSMLSVPSI
FYRPKGREEEADGVREKFQVPESDHLTYLNVYLQWKQNNYNSSWCNEHFIHVKAMRKVRE
VRQQLKDIMIQQKLNVKSCGTDWDIVRKCICSAYFYQAARLKGIGEYVNLRTGMPCHLHP
TSALYGLGTTPDYVVYHELVMTAKEYMQCATAVDGYWLAELGPMFFSVKETGRSGREKKK
QAAEHLKEMETQMQLAQEQMEERKLQAAQREEQMTPKQEIITPGGATPRRTPARIGL
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgacgatgttggtgtgcaccgccttgaaggctccaccggcaatgttcgtggc
ggacttgtaattaaaaagacgaaagaggagggtggcggtagtaaattcaaaatgcccaaa
ccgtccatactaggattagatcgtttagcagcgcaacgtcgtaaagagcgagaggaagca
caacgattgatatcttttaaagataatgaaaatgatgaagatgatcataaaggtggcgta
tctgctacatccgctggtgacgaatttgctttcaaaaagcccgataccaataagataact
aggcagttaagagaatcaagagtggagacaccttctcataccggtggtgtatctgaagag
gcgcgagaacgtttgcgtgagcatgttaaacgggatagagagcgcactactaaaggcgga
atgcgttattccacacgtgaagacagtaaacgagataacagagatcgttcatcatcaagt
tcgtcaagtcgtgatcgagatcgcgatagagatcgtcgtcgcgaaagagatagaccaaga
gattatgagcgtgatcgcaatcgtggcagatatcaagataaagacagaaatagagacaaa
gaacgtcgagatcgtagtagagaaaattcagaacgtggtaatcgtggagatgcaacttcg
gtacgtagtggcgagcgcacaccacgttttaaggatgagccacgcacacctatggacatt
tccttgaatggtagtgcgtgggatgacgacgacaatgatcgaccttcacagacaaaaaaa
tcttcttgggatttcccaacacccaagtcatatgccagttcagaacgttccgactggtct
gtgagaagtagcagtagcagtggcattggcacaagcagttctcgtggtcgttcgcgtcaa
gaacgcgaagatgatacacccagaccaacacctgcacacaactacaatgtttgggcaaat
gaccgtaaacgctctggtgctacacccgcaaccggacgcagtaatcggcaaccttggggt
gaaagtgaagaagatcgagacatgtgggaggaagagcaacgccgcctagatcgtgaatgg
tataacattgatgaaggttacgatgatgaaaataatccattctccggtgccaatgcagac
tactttagaaaacgtgaggaaataatcgagcaaaaacgtacgaaacgtattagcgctcag
cagcgccaaattaacaaagataatgagttgtgggagcgcaatcgcatgcttacatcaggc
gtagtaatgtccattaatgtaaatgaagatttcgacgaggaagcgttagagcgtgtgcat
ttgttggtgcatcatatcattccaccgtttctcgatggacgaatcgtattcaccaagcaa
cccgaacccgttatacccgtcaaagatccaacctctgacatggcattgattgcacgtaaa
ggcagcagcttggtgcgtgtttaccgcgaacaaaaagaacgccgtaaggcccaaaagaaa
cactgggagttgggcggtaccaaattgggtaacattatgggtatcgagaagaaggtagat
gaagaggatgccaagttcgataaggacacggatacggcagattatcgacgtgatcaaaaa
ttcgccgaacacatgcgtgaacaagattctggtggtaaaagtgatttcgcacgcaagaag
acaatcgctgagcagcgtagatttctacccgtatttgctgtgcgccaagaactgctgaac
gtaattcgcgagaactcggttgttattattgtgggtgaaacgggtagcggtaaaacaaca
caattgacacagtatttgcatgaagacggttatagtaactttggtatgatcggttgcacg
cagccgcgtcgtgttgcagccatgtcggtggcgaaacgtgtctcggacgaaatgggcaca
aagttgggcgatgaagtgggttatgctatacgtttcgaggattgcacttctgagaaaact
gttatcaaatacatgactgatggtatcctattgcgtgaaagcttacgtgatccagatttg
gatggttactctgccattattatggatgaagcgcacgaacgttcgctctccacggatgta
ctcttcggtttgttacgtgagatcgttgcccgtcgccatgatctcaagctgatcgtcact
tctgccacgatggattccacgaaatttgctacattctttggtaatgtaccgaactttacc
atacccggacgtacattccccgtcgatgtgatgtttagtaaaaatacttgtgaggactat
gtggaatcggcggtcaaacaagcactacaagtccatcttacgcccaacgagggtgatatg
ctattattcatgcccggtcaagaggatatcgaagtcacttgtgaagtgttggccgaacgt
ttggcagaaatcgacaacgcacccgaactatccatactaccgatctactcgcaattaccc
tccgatctacaagcgaaaatatttcaaaaatcacctgaaggcttacgcaaatgtgtggtc
gccacaaatatcgctgagacttcactgactgtcgacggtattatctatgtcatcgattcg
ggttattgtaaactaaaagtctacaatccgcgcatcggtatggatgcactgcagatttat
cccatatcgcaagcgaatgccaatcaacgttcgggtcgtgccggtcgtacaggacccgga
caggcgtttcgcctctacacgcagcggcaatacaaggaagatctactgccgctgactgtg
cccgagatacaacgtaccaatttggcgaacacggtgttgttgctgaaatcgttgggcgtt
gtggatctgctgcagttccatttcatggatccaccgccacaagataatatcctaaattcg
ctatatcagttgtggatactcggcgcattggaccacactggcgcattgacaccgcttggt
cgacagatggccgagtttccgctcgatccgccgcagtgccaaatgctgatcgtttcctgc
aaaatggaatgcagcgctgaggtgctcatcatagtctccatgctttctgtgccctccatt
ttctaccgacccaagggacgcgaggaagaagctgatggtgtgcgagagaagttccaagtg
ccggaatcggaccatctcacctacctcaatgtgtatctgcagtggaagcagaataattac
aattccagctggtgcaatgagcacttcatacacgtcaaggccatgcgaaaggtgcgtgaa
gtacgccaacagctcaaggacattatgatccagcagaaactcaatgtgaaatcctgcggc
accgattgggacattgtgcgcaagtgcatttgctctgcgtatttctatcaagcagcgcgc
ctcaaaggcatcggcgagtatgtgaacttgcgtaccggcatgccatgtcatctacatccc
acctctgcgctctatggactcggcaccacacccgattatgtggtctatcatgagctcgtc
atgaccgccaaagagtatatgcaatgcgccacagccgtcgacggttattggttggccgaa
ctgggtcccatgttcttttctgttaaggaaaccggtcgcagcggacgtgagaagaagaaa
caagcggcggaacatctgaaggaaatggagacacagatgcagttagcgcaggagcaaatg
gaagaacgcaaattgcaggcggctcaacgtgaggagcaaatgacgccgaagcaggagatc
ataacacccggtggtgccacacccagacgcacgcccgctcgtattggcttgtaa
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integrated database retrieval system
