Bactrocera dorsalis (oriental fruit fly): 105227049
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Entry
105227049 CDS
T09719
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
bdr
Bactrocera dorsalis (oriental fruit fly)
Pathway
bdr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bdr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105227049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdr03019
]
105227049
Messenger RNA biogenesis [BR:
bdr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
105227049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
105227049
NCBI-ProteinID:
XP_011204508
UniProt:
A0A8N4L2D1
A0A034WE34
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Position
2:105958945..105961544
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AA seq
664 aa
AA seq
DB search
MADDTNEDSWLYGTSNPDSTTNEENVEAAAGIGDERPLLSQKSENEATALGGASEATVPP
LGGSPNEEEPFGEFEDPAQEMEEDEEAAAAAASTVADTTDGDDDGGGENAQKSKSSEDGE
ANSDDDDDSDDDINVVIGDIKAAPSTYNIKQRTNLLGGPPGSGQEKTKSGAPGGKFSVED
FEGVGTINGVPAHEFSIDSLEDKPWRKPGADITDYFNYGFNEETWRAYCERQKRFRIQES
GVGLASLTQNINQSGERQHDGPANGAPITTMTQGMVPEQMQLPPPGILPPPQGMHHGPPR
MGMGMPRGPRPIISTNSKENPIQVMTAECREYSRPGTVSQIPTNFGAPPPNDEPYFPEPE
TFDYGYEPTQESQWNNENPNWMPSGIKELTPGPSMAPPPAAGMAGPPGVPPMGVPPPQIG
GPPPQMRQHPPLLPGMPPPNMGMGPPPPGMGMMMGPGGAPPMRMPMGPPRMMAPHGGGGP
PNPVLMDRERHEREREREREYERTDRRDRDRDRDRERDRETERERERERERERERERPRR
ERSRSREKPRRRSKSREKERDRERDRERERDRESDRERERDRSEKLDDSDRVVDEERERR
RRDRERDRERERSRRERSRSREKTRRRSKSREKERERSSKTSSTSSTNRSDKKKSHRKDK
EEEE
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgatacgaatgaggatagctggctctatggcacatcaaatcctgattctaca
acaaatgaagagaatgttgaggcggcagccggcattggcgatgaaagaccgcttctttcg
caaaaatcagaaaatgaagcaacagctttgggaggagcaagtgaagcaacagtgccacca
cttggggggtctcctaatgaagaggagccgtttggggaattcgaagatccagcgcaagaa
atggaagaggatgaagaagccgcagcggcagctgctagcacagtggctgatactactgat
ggcgatgacgatggtgggggcgaaaacgcacaaaagtcgaaaagttcggaagatggtgag
gcgaattctgatgatgacgacgattccgacgatgatattaatgtggtaattggtgatata
aaagcagcacccagcacgtacaatattaagcagcgaacaaatttattgggtggaccacca
ggatcaggccaagaaaagaccaagtctggcgcgccaggcggaaaattcagtgttgaagat
tttgaaggcgttggtactataaacggtgttccagcacatgagtttagtattgattcatta
gaagataaaccgtggcgaaaacctggagccgatataacagattattttaattacggtttc
aatgaagagacctggcgtgcttattgtgaacgacagaaaagatttcgtattcaagaaagt
ggtgttggcttggctagtttaacacaaaacataaatcaatctggcgaaagacagcatgac
ggtcctgcaaatggtgcaccgattaccacaatgacacaagggatggtgccggagcagatg
caattgccaccaccaggaatattgccaccacctcaaggtatgcatcatggaccgcctcgt
atgggtatgggtatgccacgtggaccaagaccaattatcagtacgaacagtaaagagaat
cctattcaagtaatgacagctgaatgtcgtgaatattcacgtcctggtacggtatcacaa
ataccaacaaattttggtgcaccaccgcctaatgacgaaccgtatttcccggaacccgaa
acatttgactatggttatgagcctacacaagagtcacaatggaataatgaaaatccaaat
tggatgccttcaggaataaaagagttgacgcccgggcctagtatggcaccaccacctgca
gctggtatggctgggccacctggtgtgccacccatgggtgtccctccaccacaaatcggg
ggaccgcccccacaaatgcgtcaacatccaccattattacctggaatgcctccaccaaat
atgggcatggggccacctccaccaggtatgggtatgatgatgggtcccggaggagcgcca
ccaatgagaatgccaatggggccaccacgaatgatggctccacatggtggtggtgggcca
ccaaatcccgtccttatggatcgcgaacggcacgagcgtgagcgtgaaagagagcgggaa
tatgagcgtacggaccgaagggatagagacagggatcgtgaccgtgaaagagatcgagaa
accgaaagagagcgagaacgtgaacgagagcgagaaagagaacgtgaaagaccccgacgt
gaacgttcacgtagccgtgaaaaaccccgaagacgttcgaaatcgcgtgaaaaagagcgt
gaccgcgaacgagacagagaacgtgaacgtgatcgagaatccgatcgagaaagggaacga
gacaggagcgaaaaacttgatgactctgatcgtgtggtagatgaagaacgtgaacgaaga
cgacgcgatcgggagcgagatcgtgaacgagaaaggtcgcggcgagagcgctcgcgtagc
cgtgaaaagactcgacgccgctccaaatctcgtgaaaaagagcgtgagagaagcagtaaa
acaagtagcacatcttcaacaaatcgtagtgacaagaaaaaatctcatcgtaaagataaa
gaagaagaagagtaa
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