Bactrocera dorsalis (oriental fruit fly): 105228091
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Entry
105228091 CDS
T09719
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B
KO
K11267
sister chromatid cohesion protein PDS5
Organism
bdr
Bactrocera dorsalis (oriental fruit fly)
Brite
KEGG Orthology (KO) [BR:
bdr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bdr03036
]
105228091
03400 DNA repair and recombination proteins [BR:
bdr03400
]
105228091
Chromosome and associated proteins [BR:
bdr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
105228091
DNA repair and recombination proteins [BR:
bdr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
105228091
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
105228091
NCBI-ProteinID:
XP_049308244
UniProt:
A0ABM3JG92
LinkDB
All DBs
Position
3:complement(412016..418054)
Genome browser
AA seq
1239 aa
AA seq
DB search
MTDVKYPSGCRPLTEDLGTDELIRRLKTLAHALQAMGQDEKHVPDYIQLALMLVDEYFLQ
HSSRDVQLLVACCIADILRVFAPEAPYKDQDQIKAIFMFFIKQLNGLKDPKDASFKRYFY
LLENLAFVKSFNMCFEIEDCQKIFCQLFAMMFRIINDDHSTKVKNFMIDIMSPLITEADN
LTTPLLDLILINIVEPQKSANIHAYHLAEQLIQKTSYALEPVIKIFFNQVLILGKIDKNI
TVTAKMYDLIYELYQISPNLMCSVLPQLECKLKSTTEIERMKAVSLLARMFSEKDSQLSK
KHTSLLRMLLGRFCDIAAAIRVKCVQSSMHFLLNHPHLRKEITDCLRARQHDSDETVRYE
VVMAIVATAKREFNIVCESQDLLHIVRERTLDKKFKIRKEAMNGLAFIYKRVLCEPNDLS
LDLKESVSWIKNKILHGYYMPGIEDRLLVERLLITCLVPYKLPSEERMKKLYLLLGTLDD
NAMKAFMEIQKNQMKTRKTVSDWVKMHHTKELTQKMQNQLNVKQAIICKLLPDPIKAAEF
IAKFSVNMRKDASLLRYMEIILKRDVSCKECADTMSLLLKKLGNPMAANLYYNTVKMLIE
RIASVMVDKESIGILISLVDQCMQRGKIVEEMGVPSEEAGERGLKFLCMLSYIFSAHFFT
DETLGHMIALLSHEEDYAAPLILKALVHLGRYQPLCDINPTVLEALASICKDFALTGTVK
QAKHAVRCIFVNVQTQMTGSAGADSINPATKTPIVHPIFNEIIESLRVTLSPQDPYQHTK
ICTLGHIAYHMPQAFLTPVKNMIARRVVKELLIQGVSESRDCDLPVGDWCSKEMLPADTL
CKLDALKTMARWLIGLRSDEHAAQKTFRMLIAFINQRGDLLEQNRLCPAEKSWLRLSAAC
AMLKICEQKGVGDQCNAEQYFNLSQVMCDPVSEVRDIFAQKLHKGLGKGLPNKCLPLDFM
GYYVLVGRETEKRQSEVIRNYVEMDVNKRREYIKTIATMSTDSKNDAQTAYLLPDFMLAF
AIPVLAHDPAFTDYEDRVQLKQVEKCLRFILEPLMMKREAFSYSFYVNLIQMMKNHQDTT
PNAEDNSYNLKMWAACDLALYIINSKIGDGSTSSNSFPVTIHLPEMYYKPLDKPDNNTKV
YIPLDTYTLASGPISAASKLTSSTAVSAPVVKKINTSAASSANLTLRLVGDKRTTDHLPS
NENSPTNAQDNAVTYDDGSIAEPPAKRTRGPLRAGRTVS
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atgacggacgtaaaatatccctcaggttgtcgtccgctgactgaggatttagggacggac
gagcttatccgcagacttaagactctagctcatgcgttacaagctatgggccaagatgaa
aaacacgttcctgattatatacaattagcactgatgctggtagatgaatactttctacaa
cattcatcgcgcgatgttcaacttttagtggcatgttgcattgctgatatattgcgagtt
tttgcccccgaggcaccttataaagaccaggaccaaatcaaagcaatatttatgtttttc
attaaacagcttaacggtctcaaagatccaaaagatgcgtctttcaaaaggtatttttac
ctgcttgaaaacttagccttcgtaaaatctttcaatatgtgctttgaaattgaagattgc
caaaaaattttctgccaactctttgcaatgatgtttagaattattaacgatgatcacagc
accaaagtaaaaaatttcatgattgatatcatgagtcctcttattacggaagctgacaat
ttgactacaccattattagatttaatcttgattaacattgtagagcctcaaaaatcggct
aacattcacgcctatcatttagcggagcaattgattcaaaagacaagttacgcattggaa
cccgtcataaaaattttttttaaccaagtccttatattgggtaaaattgataaaaatatt
acggttacagcaaaaatgtatgatctcatctacgaactatatcaaattagtccgaatctg
atgtgctccgtgctgccacaacttgaatgcaaactaaagtctacaactgaaatagaaagg
atgaaggcggtatccttattagctcgaatgttttccgaaaaggactcacagctctcaaaa
aaacatacctcattattgcgaatgcttttgggtcgtttttgcgacattgctgcagcgata
cgcgttaagtgtgtacaatcttcaatgcattttctattaaatcatccacatttgcgaaaa
gaaataaccgactgtttacgtgctcgtcaacatgattccgatgaaacagtccgctatgaa
gtggttatggccattgttgcgacggccaaaagggaatttaatatagtatgtgagtcacag
gatttattgcatattgtacgagaacgcacgctggataaaaaatttaaaatccgtaaagaa
gctatgaatggtctggcatttatttacaaaagggttttgtgtgaacccaatgacctatca
ctcgacttaaaggaatctgtaagttggataaaaaataaaatattacatggttattatatg
cccggaatcgaggatcgactcctcgttgaacgtttacttatcacctgcctcgtaccgtac
aaattgccttcagaggaaagaatgaagaagttataccttcttctgggtacactcgatgat
aatgctatgaaagcgtttatggaaattcaaaaaaatcaaatgaaaacacgaaaaaccgtt
agtgattgggtaaaaatgcatcacaccaaagagcttacacaaaaaatgcaaaaccaactt
aacgttaaacaggccataatttgcaagttactgccagatcctattaaagcggctgaattt
atagcaaaattcagcgttaatatgcgcaaagatgcatctttactgcgttatatggagata
attttaaagcgggatgtgtcttgcaaagaatgtgctgacacaatgtcattgcttctaaag
aaacttggaaatccaatggcggccaacttatattacaataccgtcaaaatgttgattgaa
cgaattgcgtcagtcatggtagataaggaatcaatcggtattttaataagccttgttgac
caatgcatgcaacgtggcaaaattgtagaagaaatgggtgtacccagtgaggaagccggt
gaacgtggtcttaaattcttatgtatgctttcgtatatattttctgcgcattttttcacc
gatgaaaccttaggacacatgatcgccttattaagtcacgaggaggattacgctgcacct
cttatactgaaggctctcgtacatctcggccgatatcaacccttatgtgacatcaatcca
actgttttggaagcactggcttcaatttgcaaagactttgcattaacaggaacggtaaag
caagccaaacacgcagtgcgttgcatatttgttaacgtgcaaactcaaatgaccggaagc
gctggtgctgattctattaatcctgcaacaaaaacgcctatagttcatccaatatttaat
gaaatcattgaatctttacgggttacactctctccacaagatccatatcaacatacaaaa
atttgtaccctgggccatatcgcctaccacatgccacaagcctttctcactccagtcaaa
aatatgattgcaaggcgtgttgtcaaggagttactgattcaaggcgtttctgagtcacgg
gactgcgacttaccggttggtgactggtgcagtaaagaaatgttgcctgctgacacactt
tgcaaattggacgctcttaaaacaatggcacgttggctaatcggtttgcgttcagatgag
catgcagcacagaaaacatttcgtatgctgatcgctttcataaatcagcgtggtgatttg
ttggaacagaatcgcttgtgtcccgctgaaaaatcatggctgaggcttagtgctgcttgt
gctatgctgaagatttgcgagcaaaaaggagttggagatcaatgcaatgctgaacaatat
ttcaatttatcgcaagtcatgtgtgatcccgtgtccgaggtgcgcgatatattcgctcag
aagttacataaaggactgggcaaaggtttgcccaataaatgcttaccactcgattttatg
ggatattatgttctagttggtcgtgaaactgaaaaaagacaatctgaggtcattcggaac
tatgtggaaatggacgtcaacaaaaggcgtgaatatatcaaaacaatagcgacaatgtcg
acggacagcaaaaatgatgcgcaaaccgcttaccttttacctgatttcatgttagcgttt
gcgatacctgttttagcacatgacccagccttcaccgactacgaagatcgtgtacagcta
aaacaagtggagaaatgtttgcgctttattcttgaaccgcttatgatgaagcgtgaagcg
ttctcatacagcttctacgtgaatttgatacagatgatgaaaaaccaccaggacacgaca
ccgaatgcagaagataattcatataacttaaaaatgtgggcagcatgtgatctagcactg
tacataatcaactcgaaaataggcgatggcagcacatcttcaaactcttttcctgtaaca
atacacttaccagaaatgtattataaacctttggataaaccggacaacaatacaaaggta
tacatacctttagacacttacacattagcgtcaggtccaatatctgcggcgtcaaaatta
acctcatcaacagcagtctcagcaccggtcgttaaaaaaatcaatacttcggccgccagc
agtgcgaatcttacattgcgtttagttggcgataaacgaacaactgatcatctgccgagc
aatgaaaactcgccaactaatgcacaagataatgctgtcacgtacgacgatggtagcata
gctgaaccaccagccaagcgaacgcgcggtccattacgagcaggaagaaccgtttcataa
DBGET
integrated database retrieval system
